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Protein

Endoglucanase 6

Gene

At1g64390

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei411By similarity1
Active sitei463By similarity1
Active sitei472By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Enzyme and pathway databases

BioCyciARA:AT1G64390-MONOMER

Protein family/group databases

CAZyiCBM49 Carbohydrate-Binding Module Family 49
GH9 Glycoside Hydrolase Family 9

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 6 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 6
Gene namesi
Ordered Locus Names:At1g64390
ORF Names:F15H21.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G64390
TAIRilocus:2014205 AT1G64390

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000024925923 – 620Endoglucanase 6Add BLAST598

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi554N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi564N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ42059

PTM databases

iPTMnetiQ42059

Expressioni

Gene expression databases

ExpressionAtlasiQ42059 baseline and differential
GenevisibleiQ42059 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G64390.1

Structurei

3D structure databases

ProteinModelPortaliQ42059
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IDXW Eukaryota
ENOG410XPC9 LUCA
HOGENOMiHOG000021033
InParanoidiQ42059
OMAiYPRQAHH
OrthoDBiEOG093604NE
PhylomeDBiQ42059

Family and domain databases

Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR019028 CBM_49
IPR001701 Glyco_hydro_9
IPR033126 Glyco_hydro_9_Asp/Glu_AS
IPR018221 Glyco_hydro_9_His_AS
PfamiView protein in Pfam
PF09478 CBM49, 1 hit
PF00759 Glyco_hydro_9, 1 hit
SMARTiView protein in SMART
SM01063 CBM49, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
PROSITEiView protein in PROSITE
PS00592 GLYCOSYL_HYDROL_F9_1, 1 hit
PS00698 GLYCOSYL_HYDROL_F9_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q42059-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR
60 70 80 90 100
VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
110 120 130 140 150
GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR
160 170 180 190 200
PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
210 220 230 240 250
HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN
260 270 280 290 300
QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
310 320 330 340 350
PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL
360 370 380 390 400
TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
410 420 430 440 450
GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA
460 470 480 490 500
IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
510 520 530 540 550
VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST
560 570 580 590 600
TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
610 620
FVYIHSTTPA NVAVSSYTLA
Length:620
Mass (Da):68,592
Last modified:September 5, 2006 - v2
Checksum:i57847AE1990D427F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti196R → K in AAN31840 (PubMed:14593172).Curated1
Sequence conflicti442S → V in CAA81116 (PubMed:8580968).Curated1
Sequence conflicti511 – 514MPIR → NAYS in CAA81116 (PubMed:8580968).Curated4

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC066689 Genomic DNA Translation: AAG51703.1
CP002684 Genomic DNA Translation: AEE34236.1
AF372940 mRNA Translation: AAK50080.1
AY143945 mRNA Translation: AAN28884.1
BT000696 mRNA Translation: AAN31840.1
Z25957 mRNA Translation: CAA81116.1
PIRiA96668
RefSeqiNP_176621.1, NM_105114.3
UniGeneiAt.17827
At.37005
At.72671

Genome annotation databases

EnsemblPlantsiAT1G64390.1; AT1G64390.1; AT1G64390
GeneIDi842747
GrameneiAT1G64390.1; AT1G64390.1; AT1G64390
KEGGiath:AT1G64390

Similar proteinsi

Entry informationi

Entry nameiGUN6_ARATH
AccessioniPrimary (citable) accession number: Q42059
Secondary accession number(s): Q8H160, Q9C7W3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: September 5, 2006
Last modified: April 25, 2018
This is version 126 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health