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Q42007 (Q42007_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAA79182.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length85 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Biological processPhotosynthesis SAAS SAAS023329
   Cellular componentChloroplast SAAS SAAS023329
Plastid
Gene Ontology (GO)
   Biological_processphotosynthesis, light harvesting

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: UniProtKB-KW

membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAA79182.1
Non-terminal residue851 EMBL CAA79182.1

Sequences

Sequence LengthMass (Da)Tools
Q42007 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: F2EFFE1B7913ACEF

FASTA859,379
        10         20         30         40         50         60 
VKYLGPFSGE SPSYLTGEFP GDYGWDTAGL SADPETFARN RELEVIHSRW AMLGALGCVF 

        70         80 
PELLARNGVK FESVWFKAGS QIFSD 

« Hide

References

[1]"The Arabidopsis thaliana transcribed genome: the GDR cDNA program."
CNRS
Submitted (NOV-1992) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Flower buds of A.thaliana ecotype columbia C24 EMBL CAA79182.1.
[2]Mache R., Quigley F., Thomas F., Yu DY.
Submitted (NOV-1992) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Flower buds of A.thaliana ecotype columbia C24 EMBL CAA79182.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z18413 mRNA. Translation: CAA79182.1.
IPIIPI00547631.

3D structure databases

ProteinModelPortalQ42007.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ42007.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Gene expression databases

ArrayExpressQ42007.
GenevestigatorQ42007.

Family and domain databases

Gene3D1.10.3460.10. 1 hit.
InterProIPR001344. Chloro_AB-bd_pln.
IPR022796. Chloroa_b-bind.
IPR023329. Chlorophyll_a/b-bd_dom.
[Graphical view]
PANTHERPTHR21649. PTHR21649. 1 hit.
PfamPF00504. Chloroa_b-bind. 1 hit.
[Graphical view]
SUPFAMSSF103511. SSF103511. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ42007_ARATH
AccessionPrimary (citable) accession number: Q42007
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 3, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)