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Protein

Tubulin gamma-1 chain

Gene

TUBG1

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi142 – 148GTPSequence analysis7

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Tubulin gamma-1 chain
Alternative name(s):
Gamma-1-tubulin
Gene namesi
Name:TUBG1
Synonyms:TUBC, TUBG
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Unplaced

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton, Microtubule

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000484711 – 469Tubulin gamma-1 chainAdd BLAST469

Proteomic databases

PaxDbiQ41807.
PRIDEiQ41807.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G073888_P01.

Structurei

3D structure databases

ProteinModelPortaliQ41807.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tubulin family.Curated

Phylogenomic databases

eggNOGiKOG1374. Eukaryota.
COG5023. LUCA.
HOGENOMiHOG000165714.
KOiK10389.

Family and domain databases

CDDicd02188. gamma_tubulin. 1 hit.
Gene3Di1.10.287.600. 1 hit.
3.30.1330.20. 1 hit.
3.40.50.1440. 1 hit.
InterProiIPR002454. Gamma_tubulin.
IPR008280. Tub_FtsZ_C.
IPR000217. Tubulin.
IPR018316. Tubulin/FtsZ_2-layer-sand-dom.
IPR023123. Tubulin_C.
IPR017975. Tubulin_CS.
IPR003008. Tubulin_FtsZ_GTPase.
[Graphical view]
PANTHERiPTHR11588. PTHR11588. 1 hit.
PTHR11588:SF7. PTHR11588:SF7. 1 hit.
PfamiPF00091. Tubulin. 1 hit.
PF03953. Tubulin_C. 1 hit.
[Graphical view]
PRINTSiPR01164. GAMMATUBULIN.
PR01161. TUBULIN.
SMARTiSM00864. Tubulin. 1 hit.
SM00865. Tubulin_C. 1 hit.
[Graphical view]
SUPFAMiSSF52490. SSF52490. 1 hit.
SSF55307. SSF55307. 1 hit.
PROSITEiPS00227. TUBULIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q41807-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPREIITIQV GQCGNQIGME FWKQLCLEHG IGKDGLLEDF ATQGGDRKDV
60 70 80 90 100
FFYQADDQHF IPRSLLIDLE PRVINGIQNS EYRNLYNHEN IFVAEHGGGA
110 120 130 140 150
GNNWASGYHQ GEQFVDDIMD MVDREADGSD SLEGFVLCHS IAGGTGSGMG
160 170 180 190 200
SYLLETLNDR YSKKLVQTYS VFPNQVETSD VVVQPYNSLL TLKRLTLNAD
210 220 230 240 250
CVVVLDNTAL NRIAVERLHL SNPTFAQTNS LVSTVMSAST TTLRYPGYMN
260 270 280 290 300
NDLVGLLASL IPTPRCHFLM TGYTPLTVER QVNMIRKTTV LDVMRRLLQT
310 320 330 340 350
KNIMVSSYAR TKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF
360 370 380 390 400
IYWAPASIQV ALSRKSPYVQ TTHRVSGLML ANHTSIRHLF SKCLGQYEKL
410 420 430 440 450
RKKQAFLDNY RKFPMFADND LSEFDESREI IESLVDEYKA CESPDYIKWG
460
MEDPGEANVV AALDSKLVV
Length:469
Mass (Da):52,933
Last modified:November 1, 1996 - v1
Checksum:i0B4C8857C527D19E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti352Y → D in CAA58670 (Ref. 2) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80375 mRNA. Translation: CAA56592.1.
X83695 mRNA. Translation: CAA58670.1.
RefSeqiNP_001105468.1. NM_001111998.1.
XP_008655438.1. XM_008657216.1.
UniGeneiZm.78151.

Genome annotation databases

GeneIDi542436.
KEGGizma:542436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80375 mRNA. Translation: CAA56592.1.
X83695 mRNA. Translation: CAA58670.1.
RefSeqiNP_001105468.1. NM_001111998.1.
XP_008655438.1. XM_008657216.1.
UniGeneiZm.78151.

3D structure databases

ProteinModelPortaliQ41807.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G073888_P01.

Proteomic databases

PaxDbiQ41807.
PRIDEiQ41807.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi542436.
KEGGizma:542436.

Phylogenomic databases

eggNOGiKOG1374. Eukaryota.
COG5023. LUCA.
HOGENOMiHOG000165714.
KOiK10389.

Family and domain databases

CDDicd02188. gamma_tubulin. 1 hit.
Gene3Di1.10.287.600. 1 hit.
3.30.1330.20. 1 hit.
3.40.50.1440. 1 hit.
InterProiIPR002454. Gamma_tubulin.
IPR008280. Tub_FtsZ_C.
IPR000217. Tubulin.
IPR018316. Tubulin/FtsZ_2-layer-sand-dom.
IPR023123. Tubulin_C.
IPR017975. Tubulin_CS.
IPR003008. Tubulin_FtsZ_GTPase.
[Graphical view]
PANTHERiPTHR11588. PTHR11588. 1 hit.
PTHR11588:SF7. PTHR11588:SF7. 1 hit.
PfamiPF00091. Tubulin. 1 hit.
PF03953. Tubulin_C. 1 hit.
[Graphical view]
PRINTSiPR01164. GAMMATUBULIN.
PR01161. TUBULIN.
SMARTiSM00864. Tubulin. 1 hit.
SM00865. Tubulin_C. 1 hit.
[Graphical view]
SUPFAMiSSF52490. SSF52490. 1 hit.
SSF55307. SSF55307. 1 hit.
PROSITEiPS00227. TUBULIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTBG1_MAIZE
AccessioniPrimary (citable) accession number: Q41807
Secondary accession number(s): Q41873
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.