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Protein
Submitted name:

CcmC

Gene

ccmC-1

Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CcmCImported
Submitted name:
CcmC proteinImported
Submitted name:
CcmC-1Imported
Submitted name:
CcmC-2Imported
Submitted name:
Putative heme ABC transporter membrane domainImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ccmC-1Imported
Synonyms:ccmCImported, ccmC-2Imported, orf240Imported
Encoded oniMitochondrionImported
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeTriticinaeTriticum
Proteomesi
  • UP000019116 Componenti: Mitochondrion

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4020HelicalSequence analysisAdd
BLAST
Transmembranei60 – 8021HelicalSequence analysisAdd
BLAST
Transmembranei92 – 11019HelicalSequence analysisAdd
BLAST
Transmembranei122 – 14019HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionImported

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 172157Cytochrom_C_asmInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

OMAiSERADIF.

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003557. Cyt_c_biogenesis_CcmC.
[Graphical view]
PfamiPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01386. CCMCBIOGNSIS.
TIGRFAMsiTIGR01191. ccmC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q41574-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVSLLQPYF FMSKTKSYAQ ILIGSRLFLT AMAIHLSLRV APPDLQQGGN
60 70 80 90 100
SRISYVHVPA ARMSIVIYIA TAINSSLFPL TKHPLFLRSS GTGTEIGAFS
110 120 130 140 150
TLFTLVTGGF RGRPMWGTFR VWDARLTSVF ILFLIYLGAL RFQKLPVEPA
160 170 180 190 200
PISIRAGPID IPIIKSPVNW WNTSHQPGSI SRSGTSIHVP MPIPILSNFA
210 220 230 240
NFPFSTRILF VLETRLPIPS FPESPLTEEI EAREGIPLKT
Length:240
Mass (Da):26,596
Last modified:November 1, 1996 - v1
Checksum:i45C2052A3C255FF9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU534409 Genomic DNA. Translation: ACA62642.1.
GU985444 Genomic DNA. Translation: ADE08113.1.
GU985444 Genomic DNA. Translation: ADE08114.1.
AP008982 Genomic DNA. Translation: BAE47674.1.
X79609 Genomic DNA. Translation: CAA56116.1.
PIRiS62088.
RefSeqiYP_398410.1. NC_007579.1.

Genome annotation databases

EnsemblPlantsiEPlTAET00000010149; EPlTAEP00000010114; EPlTAEG00000010149.
Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.
Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.
Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.
Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.
Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.
Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.
Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.
Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.
Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.
Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.
Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.
GeneIDi3800049.
GrameneiEPlTAET00000010149; EPlTAEP00000010114; EPlTAEG00000010149.
Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.
Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.
Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.
Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.
Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.
Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.
Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.
Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.
Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.
Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.
Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU534409 Genomic DNA. Translation: ACA62642.1.
GU985444 Genomic DNA. Translation: ADE08113.1.
GU985444 Genomic DNA. Translation: ADE08114.1.
AP008982 Genomic DNA. Translation: BAE47674.1.
X79609 Genomic DNA. Translation: CAA56116.1.
PIRiS62088.
RefSeqiYP_398410.1. NC_007579.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEPlTAET00000010149; EPlTAEP00000010114; EPlTAEG00000010149.
Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.
Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.
Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.
Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.
Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.
Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.
Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.
Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.
Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.
Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.
Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.
GeneIDi3800049.
GrameneiEPlTAET00000010149; EPlTAEP00000010114; EPlTAEG00000010149.
Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.1; Traes_1DS_078EA92F5.
Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.1; Traes_2AS_078EA92F5.
Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.1; Traes_4BL_078EA92F5.
Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.1; Traes_4BS_078EA92F5.
Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.1; Traes_5AL_078EA92F5.
Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.1; Traes_5BL_078EA92F5.
Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.1; Traes_5BS_078EA92F5.
Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.1; Traes_6AS_078EA92F5.
Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.1; Traes_6AS_078EA92F51.
Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.1; Traes_6BS_078EA92F5.
Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.1; Traes_7AL_078EA92F5.

Phylogenomic databases

OMAiSERADIF.

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003557. Cyt_c_biogenesis_CcmC.
[Graphical view]
PfamiPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01386. CCMCBIOGNSIS.
TIGRFAMsiTIGR01191. ccmC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Grienenberger J.
    Submitted (JUN-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CapitoleImported.
    Tissue: Etiolated seedlingsImported.
  2. "A gene proposed to encode a transmembrane domain of an ABC transporter is expressed in wheat mitochondria."
    Bonnard G., Grienenberger J.M.
    Mol. Gen. Genet. 246:91-99(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CapitoleImported.
    Tissue: Etiolated seedlingsImported.
  3. "Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome."
    Ogihara Y., Yamazaki Y., Murai K., Kanno A., Terachi T., Shiina T., Miyashita N., Nasuda S., Nakamura C., Mori N., Takumi S., Murata M., Futo S., Tsunewaki K.
    Nucleic Acids Res. 33:6235-6250(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
    Tissue: Etiolated seedlingImported.
  4. "A complete mitochondrial genome of wheat (Triticum aestivum cv. Chinese Yumai), and fast evolving mitochondrial genes in higher plants."
    Cui P., Liu H., Lin Q., Ding F., Zhuo G., Hu S., Liu D., Yang W., Zhan K., Zhang A., Yu J.
    J. Genet. 88:299-307(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Etiolated seedlingImported.
  5. "Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line."
    Liu H., Cui P., Zhan K., Lin Q., Zhuo G., Guo X., Ding F., Yang W., Liu D., Hu S., Yu J., Zhang A.
    BMC Genomics 12:163-163(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Etiolated seedlingImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
  7. EnsemblPlants
    Submitted (JUN-2015) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ41574_WHEAT
AccessioniPrimary (citable) accession number: Q41574
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 16, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.