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Protein
Submitted name:

Cf-2.2

Gene
N/A
Organism
Solanum pimpinellifolium (Currant tomato) (Lycopersicon pimpinellifolium)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Cf-2.2Imported
OrganismiSolanum pimpinellifolium (Currant tomato) (Lycopersicon pimpinellifolium)Imported
Taxonomic identifieri4084 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei1049 – 107224HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence analysisAdd
BLAST
Chaini27 – 11121086Sequence analysisPRO_5005932484Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 6739LRRNT_2InterPro annotationAdd
BLAST

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 7 hits.
PF08263. LRRNT_2. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 23 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
PROSITEiPS51450. LRR. 29 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q41398-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMMVSRKVVS SLQFFTLFYL FTVAFASTEE ATALLKWKAT FKNQNNSFLA
60 70 80 90 100
SWIPSSNACK DWYGVVCFNG RVNTLNITNA SVIGTLYAFP FSSLPSLENL
110 120 130 140 150
DLSKNNIYGT IPPEIGNLTN LVYLDLNNNQ ISGTIPPQIG LLAKLQIIRI
160 170 180 190 200
FHNQLNGFIP KEIGYLRSLT KLSLGINFLS GSIPASVGNL NNLSFLYLYN
210 220 230 240 250
NQLSGSIPEE ISYLRSLTEL DLSDNALNGS IPASLGNMNN LSFLFLYGNQ
260 270 280 290 300
LSGSIPEEIC YLRSLTYLDL SENALNGSIP ASLGNLNNLS FLFLYGNQLS
310 320 330 340 350
GSIPEEIGYL RSLNVLGLSE NALNGSIPAS LGNLKNLSRL NLVNNQLSGS
360 370 380 390 400
IPASLGNLNN LSMLYLYNNQ LSGSIPASLG NLNNLSMLYL YNNQLSGSIP
410 420 430 440 450
ASLGNLNNLS RLYLYNNQLS GSIPEEIGYL SSLTYLDLSN NSINGFIPAS
460 470 480 490 500
FGNMSNLAFL FLYENQLASS VPEEIGYLRS LNVLDLSENA LNGSIPASFG
510 520 530 540 550
NLNNLSRLNL VNNQLSGSIP EEIGYLRSLN VLDLSENALN GSIPASFGNL
560 570 580 590 600
NNLSRLNLVN NQLSGSIPEE IGYLRSLNDL GLSENALNGS IPASLGNLNN
610 620 630 640 650
LSMLYLYNNQ LSGSIPEEIG YLSSLTYLSL GNNSLNGLIP ASFGNMRNLQ
660 670 680 690 700
ALILNDNNLI GEIPSSVCNL TSLEVLYMPR NNLKGKVPQC LGNISNLQVL
710 720 730 740 750
SMSSNSFSGE LPSSISNLTS LQILDFGRNN LEGAIPQCFG NISSLEVFDM
760 770 780 790 800
QNNKLSGTLP TNFSIGCSLI SLNLHGNELE DEIPRSLDNC KKLQVLDLGD
810 820 830 840 850
NQLNDTFPMW LGTLPELRVL RLTSNKLHGP IRSSRAEIMF PDLRIIDLSR
860 870 880 890 900
NAFSQDLPTS LFEHLKGMRT VDKTMEEPSY ESYYDDSVVV VTKGLELEIV
910 920 930 940 950
RILSLYTVID LSSNKFEGHI PSVLGDLIAI RILNVSHNAL QGYIPSSLGS
960 970 980 990 1000
LSILESLDLS FNQLSGEIPQ QLASLTFLEF LNLSHNYLQG CIPQGPQFRT
1010 1020 1030 1040 1050
FESNSYEGND GLRGYPVSKG CGKDPVSEKN YTVSALEDQE SNSEFFNDFW
1060 1070 1080 1090 1100
KAALMGYGSG LCIGISIIYI LISTGNLRWL ARIIEELEHK IIMQRRKKQR
1110
GQRNYRRRNN RF
Length:1,112
Mass (Da):122,192
Last modified:November 1, 1996 - v1
Checksum:i111D20B296BAA07A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42445 Genomic DNA. Translation: AAC15780.1.
AY793348 Genomic DNA. Translation: AAX19020.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U42445 Genomic DNA. Translation: AAC15780.1.
AY793348 Genomic DNA. Translation: AAX19020.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13855. LRR_8. 7 hits.
PF08263. LRRNT_2. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 23 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
PROSITEiPS51450. LRR. 29 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The tomato Cf-2 disease resistance locus comprises two functional genes encoding leucine-rich repeat proteins."
    Dixon M.S., Jones D.A., Keddie J.S., Thomas C.M., Harrison K., Jones J.D.
    Cell 84:451-459(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Heterogeneous evolutionary processes affect R gene diversity in natural populations of Solanum pimpinellifolium."
    Caicedo A.L., Schaal B.A.
    Proc. Natl. Acad. Sci. U.S.A. 101:17444-17449(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ41398_SOLPI
AccessioniPrimary (citable) accession number: Q41398
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.