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Protein
Submitted name:

Linamarase

Gene

linamarase

Organism
Manihot esculenta (Cassava) (Jatropha manihot)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
LinamaraseImported
Gene namesi
Name:linamaraseImported
OrganismiManihot esculenta (Cassava) (Jatropha manihot)Imported
Taxonomic identifieri3983 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeCrotonoideaeManihoteaeManihot

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 531514Sequence analysisPRO_5004231643Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ41172.
SMRiQ41172. Positions 27-506.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q41172-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLVLFISLLA LTRPAMGTDD DDDNIPDDFS RKYFPDDFIF GTATSAYQIE
60 70 80 90 100
GEATAKGRAP SVWDIFSKET PDRILDGSNG DVAVDFYNRY IQDIKNVKKM
110 120 130 140 150
GFNAFRMSIS WSRVIPSGRR REGVNEEGIQ FYNDVINEII SNGLEPFVTI
160 170 180 190 200
FHWDTPQALQ DKYGGFLSRD IVYDYLQYAD LLFERFGDRV KPWMTFNEPS
210 220 230 240 250
AYVGFAHDDG VFAPGRCSSW VNRQCLAGDS ATEPYIVAHN LLLSHAAAVH
260 270 280 290 300
QYRKYYQGTQ KGKIGITLFT FWYEPLSDSK VDVQAAKTAL DFMFGLWMDP
310 320 330 340 350
MTYGRYPRTM VDLAGDKLIG FTDEESQLLR GSYDFVGLQY YTAYYAEPIP
360 370 380 390 400
PVDPKFRRYK TDSGVNATPY DLNGNLIGPQ AYSSWFYIFP KGIRHFLNYT
410 420 430 440 450
KDTYNDPVIY VTENGVDNYN NESQPIEEAL QDDFRISYYK KHMWNALGSL
460 470 480 490 500
KNYGVKLKGY FAWSYLDNFE WNIGYTSRFG LYYVDYKNNL TRYPKKSAHW
510 520 530
FTKFLNISVN ANNIYELTSK DSRKVGKFYV M
Length:531
Mass (Da):61,373
Last modified:November 1, 1996 - v1
Checksum:i4FE14D3F9FBA0F17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S35175 mRNA. Translation: AAB22162.1.
PIRiS23940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S35175 mRNA. Translation: AAB22162.1.
PIRiS23940.

3D structure databases

ProteinModelPortaliQ41172.
SMRiQ41172. Positions 27-506.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ41172_MANES
AccessioniPrimary (citable) accession number: Q41172
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 14, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.