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Protein

Aquaporin NIP1-1

Gene

NIP1-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Aquaporin NIP1-1
Alternative name(s):
NOD26-like intrinsic protein 1-1
OsNIP1;1
Gene namesi
Name:NIP1-1
Synonyms:rMIP1, YK347
Ordered Locus Names:Os02g0232900, LOC_Os02g13870
ORF Names:OJ1705_E12.32
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei50 – 7021Helical; Name=1Sequence analysisAdd
BLAST
Transmembranei78 – 9821Helical; Name=2Sequence analysisAdd
BLAST
Transmembranei129 – 14921Helical; Name=3Sequence analysisAdd
BLAST
Transmembranei166 – 18621Helical; Name=4Sequence analysisAdd
BLAST
Transmembranei194 – 21421Helical; Name=5Sequence analysisAdd
BLAST
Transmembranei236 – 25621Helical; Name=6Sequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 284284Aquaporin NIP1-1PRO_0000286026Add
BLAST

Proteomic databases

PaxDbiQ40746.

Expressioni

Tissue specificityi

Expressed in leaves and at lower levels in roots and anthers.2 Publications

Inductioni

By abscisic acid (ABA).1 Publication

Gene expression databases

ExpressionAtlasiQ40746. baseline and differential.
GenevisibleiQ40746. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g13870.1.

Structurei

3D structure databases

ProteinModelPortaliQ40746.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi107 – 1093NPA 1
Motifi219 – 2213NPA 2

Domaini

Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0223. Eukaryota.
COG0580. LUCA.
HOGENOMiHOG000288286.
InParanoidiQ40746.
OMAiAHEQRAM.
OrthoDBiEOG09360N7X.

Family and domain databases

CDDicd00333. MIP. 1 hit.
Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q40746-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGDNNSQT TNGGSGHEQR AMEEGRKQEE FAADGQGCGL AFSVPFIQKI
60 70 80 90 100
IAEIFGTYFL IFAGCGAVTI NQSKNGQITF PGVAIVWGLA VMVMVYAVGH
110 120 130 140 150
ISGAHFNPAV TLAFATCRRF PWRQVPAYAA AQMLGATLAA GTLRLMFGGR
160 170 180 190 200
HEHFPGTLPA GSDVQSLVLE FIITFYLMFV ISGVATDNRA IGELAGLAVG
210 220 230 240 250
ATILLNVLIA GPISGASMNP ARSLGPAMIG GEYRSIWVYI VGPVAGAVAG
260 270 280
AWAYNIIRFT NKPLREITKS GSFLKSMNRM NSST
Length:284
Mass (Da):29,973
Last modified:November 1, 1996 - v1
Checksum:i37963A9DF3E6C220
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17443 mRNA. Translation: BAA04257.1.
AP004070 Genomic DNA. Translation: BAD27715.1.
AP008208 Genomic DNA. Translation: BAF08289.1.
AP014958 Genomic DNA. Translation: BAS77793.1.
AK068806 mRNA. No translation available.
PIRiS52003.
RefSeqiXP_015623151.1. XM_015767665.1.
UniGeneiOs.2678.

Genome annotation databases

EnsemblPlantsiOS02T0232900-01; OS02T0232900-01; OS02G0232900.
GeneIDi4328814.
GrameneiOS02T0232900-01; OS02T0232900-01; OS02G0232900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17443 mRNA. Translation: BAA04257.1.
AP004070 Genomic DNA. Translation: BAD27715.1.
AP008208 Genomic DNA. Translation: BAF08289.1.
AP014958 Genomic DNA. Translation: BAS77793.1.
AK068806 mRNA. No translation available.
PIRiS52003.
RefSeqiXP_015623151.1. XM_015767665.1.
UniGeneiOs.2678.

3D structure databases

ProteinModelPortaliQ40746.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g13870.1.

Proteomic databases

PaxDbiQ40746.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0232900-01; OS02T0232900-01; OS02G0232900.
GeneIDi4328814.
GrameneiOS02T0232900-01; OS02T0232900-01; OS02G0232900.

Phylogenomic databases

eggNOGiKOG0223. Eukaryota.
COG0580. LUCA.
HOGENOMiHOG000288286.
InParanoidiQ40746.
OMAiAHEQRAM.
OrthoDBiEOG09360N7X.

Gene expression databases

ExpressionAtlasiQ40746. baseline and differential.
GenevisibleiQ40746. OS.

Family and domain databases

CDDicd00333. MIP. 1 hit.
Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiNIP11_ORYSJ
AccessioniPrimary (citable) accession number: Q40746
Secondary accession number(s): Q6EUF4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.