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Protein
Submitted name:

AT1 protein

Gene

AT1

Organism
Oryza sativa (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AT1 proteinImported
Gene namesi
Name:AT1Imported
OrganismiOryza sativa (Rice)Imported
Taxonomic identifieri4530 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ40725 differential

Structurei

3D structure databases

ProteinModelPortaliQ40725
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 89H15InterPro annotationAdd BLAST70

Phylogenomic databases

eggNOGiENOG410JD2Q Eukaryota
ENOG410Z72C LUCA

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR017956 AT_hook_DNA-bd_motif
IPR005818 Histone_H1/H5_H15
IPR000116 HMGA
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00538 Linker_histone, 1 hit
PRINTSiPR00929 ATHOOK
PR00930 HIGHMOBLTYIY
SMARTiView protein in SMART
SM00384 AT_hook, 13 hits
SM00526 H15, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51504 H15, 1 hit

Sequencei

Sequence statusi: Complete.

Q40725-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVAVASPSS APGPGAAGRP HPTYKEMILR ALKELPDPII SSRRAIAKYI
60 70 80 90 100
SDNFSGLPSH HDALLTVHLR RLRSQGLLLM SGHSYLLSTS ATAARGRGRG
110 120 130 140 150
RPPKKASSSA PPQKRGPGRP RKNTALFPVP VLEAKPGRGR PRKNPLPVAS
160 170 180 190 200
STSSAAAAAT ALSLRVKRGP GRPRKNAAAT PLRLGVKRGP GRPRKNAAAT
210 220 230 240 250
PLRLGAKRGP GRPRKNATAT PLSLGVKRGP GRPRKNAAAA ASPVAPPPAS
260 270 280 290 300
PLKRGVGRPR KNATPLVKPG PGRPSGFKRG PGRPRKNATP PVLSVPPTAA
310 320 330 340 350
AVLGVKRGRG RPRKDKPLQS WSVLSGGAAM TKRGAGRPRK KRPLEAGGVV
360 370 380 390 400
AAQVDTADGG EAGAVQNGGE VRCLLSDGAS SMGNRGPGSP RKEVLLENEP
410 420 430 440 450
TVSTLVGKRG RGRPKKEKPS AARPAETGDA KSMGIKRGRG RPRKDSSFQA
460 470 480 490 500
VFAEAAGQVS RDVTAAQPEG DADLLARKEP ETAAVVSVEN KETRPADAGG
510 520 530
VVVSEEKTSI DPVEAGSVMP CVNAEVDRMN SDLRTANP
Length:538
Mass (Da):55,827
Last modified:November 1, 1996 - v1
Checksum:iEC386FEF06EE1F8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X88798 mRNA Translation: CAA61276.1
PIRiS57459

Similar proteinsi

Entry informationi

Entry nameiQ40725_ORYSA
AccessioniPrimary (citable) accession number: Q40725
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health