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Q40687

- GBB_ORYSJ

UniProt

Q40687 - GBB_ORYSJ

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Protein

Guanine nucleotide-binding protein subunit beta

Gene

Os03g0669200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli

Functioni

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

GO - Molecular functioni

  1. GTPase activity Source: EnsemblPlants/Gramene
  2. signal transducer activity Source: UniProtKB-KW

GO - Biological processi

  1. abscisic acid-activated signaling pathway Source: EnsemblPlants/Gramene
  2. defense response to fungus, incompatible interaction Source: EnsemblPlants/Gramene
  3. endoplasmic reticulum unfolded protein response Source: EnsemblPlants/Gramene
  4. fruit development Source: EnsemblPlants/Gramene
  5. Golgi vesicle transport Source: EnsemblPlants/Gramene
  6. G-protein coupled receptor signaling pathway Source: Gramene
  7. hydrogen peroxide catabolic process Source: EnsemblPlants/Gramene
  8. jasmonic acid mediated signaling pathway Source: EnsemblPlants/Gramene
  9. lateral root development Source: EnsemblPlants/Gramene
  10. MAPK cascade Source: EnsemblPlants/Gramene
  11. negative regulation of abscisic acid-activated signaling pathway Source: EnsemblPlants/Gramene
  12. negative regulation of defense response Source: EnsemblPlants/Gramene
  13. negative regulation of programmed cell death Source: EnsemblPlants/Gramene
  14. organ morphogenesis Source: EnsemblPlants/Gramene
  15. protein targeting to membrane Source: EnsemblPlants/Gramene
  16. regulation of hydrogen peroxide metabolic process Source: EnsemblPlants/Gramene
  17. regulation of plant-type hypersensitive response Source: EnsemblPlants/Gramene
  18. regulation of protein dephosphorylation Source: EnsemblPlants/Gramene
  19. regulation of root development Source: EnsemblPlants/Gramene
  20. regulation of transcription, DNA-templated Source: EnsemblPlants/Gramene
  21. response to bacterium Source: EnsemblPlants/Gramene
  22. response to chitin Source: EnsemblPlants/Gramene
  23. response to cold Source: EnsemblPlants/Gramene
  24. response to ethylene Source: EnsemblPlants/Gramene
  25. response to extracellular stimulus Source: EnsemblPlants/Gramene
  26. systemic acquired resistance, salicylic acid mediated signaling pathway Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
Guanine nucleotide-binding protein subunit beta
Gene namesi
Ordered Locus Names:Os03g0669200, LOC_Os03g46650
ORF Names:OSJNBa0039O18.9
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiQ40687.

Subcellular locationi

GO - Cellular componenti

  1. Cul4-RING E3 ubiquitin ligase complex Source: EnsemblPlants/Gramene
  2. endoplasmic reticulum Source: EnsemblPlants/Gramene
  3. heterotrimeric G-protein complex Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 380380Guanine nucleotide-binding protein subunit betaPRO_0000127725Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ40687. baseline.

Interactioni

Subunit structurei

G proteins are composed of 3 units, alpha, beta and gamma.

Binary interactionsi

WithEntry#Exp.IntActNotes
GPA1Q0DJ332EBI-1100119,EBI-1100098
OSJNBa0026E05.11-1Q6YXX94EBI-1100119,EBI-1100089
RGG1Q75WU14EBI-1100119,EBI-1100093

Protein-protein interaction databases

IntActiQ40687. 3 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ40687.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati64 – 9431WD 1Add
BLAST
Repeati106 – 13631WD 2Add
BLAST
Repeati155 – 18632WD 3Add
BLAST
Repeati203 – 23432WD 4Add
BLAST
Repeati247 – 27731WD 5Add
BLAST
Repeati296 – 32631WD 6Add
BLAST
Repeati342 – 37231WD 7Add
BLAST

Sequence similaritiesi

Belongs to the WD repeat G protein beta family.Curated
Contains 7 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiCOG2319.
HOGENOMiHOG000176356.
InParanoidiQ40687.
OMAiRIVMRPR.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR001632. Gprotein_B.
IPR016346. Guanine_nucleotide-bd_bsu.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 7 hits.
[Graphical view]
PIRSFiPIRSF002394. GN-bd_beta. 1 hit.
PRINTSiPR00319. GPROTEINB.
PR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q40687-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASVAELKEK HAAATASVNS LRERLRQRRQ MLLDTDVERY SRTQGRTPVS
60 70 80 90 100
FNPTDLVCCR TLQGHSGKVY SLDWTPEKNW IVSASQDGRL IVWNALTSQK
110 120 130 140 150
THAIKLHCPW VMTCAFAPNG QSVACGGLDS ACSIFNLNSQ ADRDGNIPVS
160 170 180 190 200
RILTGHKGYV SSCQYVPDQE TRLITSSGDQ TCVLWDVTTG QRISIFGGEF
210 220 230 240 250
PSGHTADVLS LSINSSNSNM FVSGSCDATV RLWDIRIASR AVRTYHGHEG
260 270 280 290 300
DINSVKFFPD GQRFGTGSDD GTCRLFDVRT GHQLQVYSRE PDRNDNELPT
310 320 330 340 350
VTSIAFSISG RLLFAGYSNG DCYVWDTLLA EVVLNLGNLQ NSHEGRISCL
360 370 380
GLSSDGSALC TGSWDKNLKI WAFSGHRKIV
Length:380
Mass (Da):41,752
Last modified:November 1, 1996 - v1
Checksum:i36CE374E2A3E8EB0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X89737 Genomic DNA. Translation: CAA61889.1.
AC133930 Genomic DNA. Translation: AAP44640.1.
PIRiT03765.

Genome annotation databases

EnsemblPlantsiOS03T0669200-01; OS03T0669200-01; OS03G0669200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X89737 Genomic DNA. Translation: CAA61889.1 .
AC133930 Genomic DNA. Translation: AAP44640.1 .
PIRi T03765.

3D structure databases

ProteinModelPortali Q40687.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q40687. 3 interactions.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0669200-01 ; OS03T0669200-01 ; OS03G0669200 .

Organism-specific databases

Gramenei Q40687.

Phylogenomic databases

eggNOGi COG2319.
HOGENOMi HOG000176356.
InParanoidi Q40687.
OMAi RIVMRPR.

Gene expression databases

ExpressionAtlasi Q40687. baseline.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR020472. G-protein_beta_WD-40_rep.
IPR001632. Gprotein_B.
IPR016346. Guanine_nucleotide-bd_bsu.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF00400. WD40. 7 hits.
[Graphical view ]
PIRSFi PIRSF002394. GN-bd_beta. 1 hit.
PRINTSi PR00319. GPROTEINB.
PR00320. GPROTEINBRPT.
SMARTi SM00320. WD40. 7 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 1 hit.
PROSITEi PS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and characterization of a cDNA for the beta subunit of a G protein from rice."
    Ishikawa A., Iwasaki Y., Asahi T.
    Plant Cell Physiol. 37:223-228(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
    The rice chromosome 3 sequencing consortium
    Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
    , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
    Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiGBB_ORYSJ
AccessioniPrimary (citable) accession number: Q40687
Secondary accession number(s): Q7G5X0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3