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UniProtKB - Q40684 (Q40684_ORYSJ)

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Protein

Ferredoxin

Gene

Os05g0443500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.UniRule annotation

Cofactori

[2Fe-2S] clusterUniRule annotationNote: Binds 1 [2Fe-2S] cluster.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

GO - Biological processi

Complete GO annotation...

Keywordsi

Biological processElectron transportUniRule annotation, Transport
Ligand2Fe-2SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
FerredoxinUniRule annotation
Gene namesi
Name:Os05g0443500Imported
Ordered Locus Names:Os05g0443500Imported
ORF Names:B1110B01.18Imported, OSJNBa0020H14.14Imported, OSNPB_050443500Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza ›
Proteomesi
  • UP000059680 Componenti: Chromosome 5

Subcellular locationi

  • Plastid › chloroplast UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChloroplastUniRule annotation, Plastid

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g37140.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 1452Fe-2S ferredoxin-typeInterPro annotationAdd BLAST92

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
KOiK02639.
OMAiRMSNKFR.
OrthoDBiEOG09360QEN.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiView protein in InterPro
IPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
PfamiView protein in Pfam
PF00111. Fer2. 1 hit.
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiView protein in PROSITE
PS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q40684-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATATAPRLC FPKPGAAIAP ATKSPSFIGY AKQTLNMSGL RISNKFRVSA 
        60         70         80         90        100
TAVHKVKLIG PDGVEHEFEA PEDTYILEAA ETAGVELPFS CRAGSCSTCA 
       110        120        130        140 
GKMSSGEVDQ SEGSFLDENQ MGEGYVLTCI SYPKADCVIH THKEEELY
Length:148
Mass (Da):15,811
Last modified:November 1, 1996 - v1
Checksum:iA8756D5FB0FE61F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC147462 Genomic DNA. Translation: AAU90104.1.
AC137611 Genomic DNA. Translation: AAV24967.1.
D30794 Genomic DNA. Translation: BAA06456.1.
AP008211 Genomic DNA. Translation: BAF17589.1.
AK103416 mRNA. Translation: BAG96070.1.
AP014961 Genomic DNA. Translation: BAS94263.1.
PIRiT03742.
RefSeqiXP_015639074.1. XM_015783588.1.
UniGeneiOs.321.

Genome annotation databases

EnsemblPlantsiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
GeneIDi4338930.
GrameneiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
KEGGiosa:4338930.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC147462 Genomic DNA. Translation: AAU90104.1.
AC137611 Genomic DNA. Translation: AAV24967.1.
D30794 Genomic DNA. Translation: BAA06456.1.
AP008211 Genomic DNA. Translation: BAF17589.1.
AK103416 mRNA. Translation: BAG96070.1.
AP014961 Genomic DNA. Translation: BAS94263.1.
PIRiT03742.
RefSeqiXP_015639074.1. XM_015783588.1.
UniGeneiOs.321.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os05g37140.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
GeneIDi4338930.
GrameneiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
KEGGiosa:4338930.

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
KOiK02639.
OMAiRMSNKFR.
OrthoDBiEOG09360QEN.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiView protein in InterPro
IPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
PfamiView protein in Pfam
PF00111. Fer2. 1 hit.
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiView protein in PROSITE
PS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ40684_ORYSJ
AccessioniPrimary (citable) accession number: Q40684
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 10, 2017
This is version 138 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.