Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

UniProtKB - Q40684 (Q40684_ORYSJ)

UniProt

Q40684 - Q40684_ORYSJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Ferredoxin

Gene

Os05g0443500

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

2Fe-2SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
FerredoxinImported
Submitted name:
Os05g0443500 proteinImported
Submitted name:
cDNA clone:J033128I21, full insert sequenceImported
Gene namesi
Ordered Locus Names:Os05g0443500Imported
ORF Names:B1110B01.18Imported, OSJNBa0020H14.14Imported, OSNPB_050443500Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BOP clade › Oryzoideae › Oryzeae › Oryzinae › Oryza ›
Proteomesi
  • UP000059680 Componenti: Chromosome 5

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g37140.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini54 – 145922Fe-2S ferredoxin-typeInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 2Fe-2S ferredoxin-type domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
OMAiRMSNKFR.
OrthoDBiEOG09360QEN.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q40684-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATATAPRLC FPKPGAAIAP ATKSPSFIGY AKQTLNMSGL RISNKFRVSA 
        60         70         80         90        100
TAVHKVKLIG PDGVEHEFEA PEDTYILEAA ETAGVELPFS CRAGSCSTCA 
       110        120        130        140 
GKMSSGEVDQ SEGSFLDENQ MGEGYVLTCI SYPKADCVIH THKEEELY
Length:148
Mass (Da):15,811
Last modified:November 1, 1996 - v1
Checksum:iA8756D5FB0FE61F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC147462 Genomic DNA. Translation: AAU90104.1.
AC137611 Genomic DNA. Translation: AAV24967.1.
D30794 Genomic DNA. Translation: BAA06456.1.
AP008211 Genomic DNA. Translation: BAF17589.1.
AK103416 mRNA. Translation: BAG96070.1.
AP014961 Genomic DNA. Translation: BAS94263.1.
PIRiT03742.
RefSeqiXP_015639074.1. XM_015783588.1.
UniGeneiOs.321.

Genome annotation databases

EnsemblPlantsiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
GeneIDi4338930.
GrameneiOS05T0443500-01; OS05T0443500-01; OS05G0443500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC147462 Genomic DNA. Translation: AAU90104.1.
AC137611 Genomic DNA. Translation: AAV24967.1.
D30794 Genomic DNA. Translation: BAA06456.1.
AP008211 Genomic DNA. Translation: BAF17589.1.
AK103416 mRNA. Translation: BAG96070.1.
AP014961 Genomic DNA. Translation: BAS94263.1.
PIRiT03742.
RefSeqiXP_015639074.1. XM_015783588.1.
UniGeneiOs.321.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os05g37140.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS05T0443500-01; OS05T0443500-01; OS05G0443500.
GeneIDi4338930.
GrameneiOS05T0443500-01; OS05T0443500-01; OS05G0443500.

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
OMAiRMSNKFR.
OrthoDBiEOG09360QEN.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ40684_ORYSJ
AccessioniPrimary (citable) accession number: Q40684
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 131 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.