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Q40677

- ALFC_ORYSJ

UniProt

Q40677 - ALFC_ORYSJ

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Protein
Fructose-bisphosphate aldolase, chloroplastic
Gene
Os11g0171300, LOC_Os11g07020, OsJ_33121
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei85 – 851Substrate By similarity
Binding sitei175 – 1751Substrate By similarity
Active sitei215 – 2151Proton acceptor By similarity
Active sitei257 – 2571Schiff-base intermediate with dihydroxyacetone-P By similarity
Sitei388 – 3881Necessary for preference for fructose 1,6-bisphosphate over fructose 1-phosphate By similarity

GO - Molecular functioni

  1. fructose-bisphosphate aldolase activity Source: Gramene

GO - Biological processi

  1. glycolytic process Source: UniProtKB-UniPathway
  2. response to cadmium ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Glycolysis

Keywords - Ligandi

Schiff base

Enzyme and pathway databases

UniPathwayiUPA00109; UER00183.

Names & Taxonomyi

Protein namesi
Recommended name:
Fructose-bisphosphate aldolase, chloroplastic (EC:4.1.2.13)
Short name:
ALDP
Gene namesi
Ordered Locus Names:Os11g0171300, LOC_Os11g07020
ORF Names:OsJ_33121
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 11

Organism-specific databases

GrameneiQ40677.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: EnsemblPlants/Gramene
  2. chloroplast envelope Source: EnsemblPlants/Gramene
  3. chloroplast stroma Source: EnsemblPlants/Gramene
  4. chloroplast thylakoid Source: EnsemblPlants/Gramene
  5. cytoplasm Source: Gramene
  6. cytosolic ribosome Source: EnsemblPlants/Gramene
  7. thylakoid lumen Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3838Chloroplast1 Publication
Add
BLAST
Chaini39 – 388350Fructose-bisphosphate aldolase, chloroplastic
PRO_0000001112Add
BLAST

Proteomic databases

PaxDbiQ40677.
PRIDEiQ40677.

Interactioni

Protein-protein interaction databases

IntActiQ40677. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ40677.
SMRiQ40677. Positions 39-372.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG3588.
HOGENOMiHOG000220876.
KOiK01623.
OMAiVEPEIML.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view]
PfamiPF00274. Glycolytic. 1 hit.
[Graphical view]
PROSITEiPS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q40677-1 [UniParc]FASTAAdd to Basket

« Hide

MASATLLKSS FLPKKSEWGA TRQAAAPKPV TVSMVVRAGA YDDELVKTAK    50
TIASPGRGIL AMDESNATCG KRLASIGLEN TEANRQAYRT LLVTAPGLGQ 100
YISGAILFEE TLYQSTVDGK KIVDILTEQK IVPGIKVDKG LVPLAGSNNE 150
SWCQGLDGLA SREAAYYQQG ARFAKWRTVV SIPNGPSELA VKEAAWGLAR 200
YAAISQDNGL VPIVEPEILL DGEHGIDRTF EVAQKVWAET FFYMAENNVM 250
FEGILLKPSM VTPGAECKDR ATPEQVSDYT LKLLHRRIPP AVPGIMFLSG 300
GQSEVEATQN LNAMNQGPNP WHVSFSYARA LQNTCLKTWG GQPENVKAAQ 350
DALLLRAKAN SLAQLGKYTS DGEAAEAKEG MFVKNYVY 388
Length:388
Mass (Da):42,006
Last modified:October 25, 2005 - v2
Checksum:i4FFF6FAE1F6619E0
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti156 – 1561L → R in BAA02730. 1 Publication
Sequence conflicti294 – 2941G → A in BAA02730. 1 Publication
Sequence conflicti352 – 3521A → R in BAA02730. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D13513 Genomic DNA. Translation: BAA02730.1.
AC128643 Genomic DNA. Translation: AAX95072.1.
DP000010 Genomic DNA. Translation: ABA91630.2.
AP008217 Genomic DNA. Translation: BAF27707.1.
CM000148 Genomic DNA. Translation: EAZ17583.1.
AK104899 mRNA. Translation: BAG97016.1.
PIRiT03679.
RefSeqiNP_001065862.1. NM_001072394.1.
UniGeneiOs.7988.

Genome annotation databases

EnsemblPlantsiOS11T0171300-01; OS11T0171300-01; OS11G0171300.
GeneIDi4349897.
KEGGiosa:4349897.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D13513 Genomic DNA. Translation: BAA02730.1 .
AC128643 Genomic DNA. Translation: AAX95072.1 .
DP000010 Genomic DNA. Translation: ABA91630.2 .
AP008217 Genomic DNA. Translation: BAF27707.1 .
CM000148 Genomic DNA. Translation: EAZ17583.1 .
AK104899 mRNA. Translation: BAG97016.1 .
PIRi T03679.
RefSeqi NP_001065862.1. NM_001072394.1.
UniGenei Os.7988.

3D structure databases

ProteinModelPortali Q40677.
SMRi Q40677. Positions 39-372.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q40677. 1 interaction.

Proteomic databases

PaxDbi Q40677.
PRIDEi Q40677.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS11T0171300-01 ; OS11T0171300-01 ; OS11G0171300 .
GeneIDi 4349897.
KEGGi osa:4349897.

Organism-specific databases

Gramenei Q40677.

Phylogenomic databases

eggNOGi COG3588.
HOGENOMi HOG000220876.
KOi K01623.
OMAi VEPEIML.

Enzyme and pathway databases

UniPathwayi UPA00109 ; UER00183 .

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view ]
Pfami PF00274. Glycolytic. 1 hit.
[Graphical view ]
PROSITEi PS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of the chloroplastic and cytoplasmic aldolase-encoding genes implicated the occurrence of multiple loci in rice."
    Tsutsumi K., Kagaya Y., Hidaka S., Suzuki J., Tokairin Y., Hirai T., Hu D., Ishikawa K., Ejiri S.
    Gene 141:215-220(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
    The rice chromosomes 11 and 12 sequencing consortia
    BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  7. "Proteomic analysis of rice leaf, stem and root tissues during growth course."
    Nozu Y., Tsugita A., Kamijo K.
    Proteomics 6:3665-3670(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE [LARGE SCALE ANALYSIS] OF 39-45, IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiALFC_ORYSJ
AccessioniPrimary (citable) accession number: Q40677
Secondary accession number(s): Q2R9Z9, Q53P95
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: October 25, 2005
Last modified: September 3, 2014
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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