Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q40667 (Q40667_ORYSA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismOryza sativa (Rice) EMBL CAA82849.1
Taxonomic identifier4530 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Sequences

Sequence LengthMass (Da)Tools
Q40667 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: C990572C114FC0A9

FASTA31933,600
        10         20         30         40         50         60 
MRALAVVVVA TRFAVVAVPP EQCGSQAGGA LCPNCLCCSQ YGWCGSTSAY CGSGCQSQCS 

        70         80         90        100        110        120 
GSCGGGADPA SGGASGVASI VSRSLFDQML LHRNDAACPA KNFYTYDAFV AAANAYPDFA 

       130        140        150        160        170        180 
TTGDAATRKR EVAAFLAQTS HETTGGWATA PDGPYSWGYC FKEENNGNVG SDYCVQSSQC 

       190        200        210        220        230        240 
RCAGKKYYGR GPIQISYNYN YGPACQAIGS NLLSNPDLVA SDAISFKTAF WFWMTPQSPK 

       250        260        270        280        290        300 
PSCHAVMTGQ WTPNGNDQAA GRVPGYGVVT NIINGGVECG HGADSRVADR IGFYKRYCDM 

       310 
LGVSYGANLD CYNQRPFNS 

« Hide

References

[1]"Isolation and characterization of cDNA clones encoding class I chitinase in suspension cultures of rice cell."
Kim Y.K., Baek J.M., Park H.Y., Choi Y.D., Kim S.I.
Biosci. Biotechnol. Biochem. 58:1164-1166(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Isolation and characterization of the cDNA clones encoding class I chitinase in suspension cultures of rice cell."
Kim Y., Baek J., Park H., Choi Y., Kim S.
Biosci. Biotechnol. Biochem. 0:0-0(1994)
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z29961 mRNA. Translation: CAA82849.1.
PIRJC2252.

3D structure databases

ProteinModelPortalQ40667.
SMRQ40667. Positions 21-318.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39946.BGIOSIBCE023348.

Protein family/group databases

CAZyCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneQ40667.

Gene expression databases

GenevestigatorQ40667.

Family and domain databases

Gene3D3.30.60.10. 1 hit.
InterProIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFPIRSF001060. Endochitinase. 1 hit.
PRINTSPR00451. CHITINBINDNG.
ProDomPD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ40667_ORYSA
AccessionPrimary (citable) accession number: Q40667
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)