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Protein
Submitted name:

Dimeric mannose specific lectin protein

Gene

LECNPA 7

Organism
Narcissus hybrid cultivar 2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei41MannoseCombined sources1
Binding sitei49MannoseCombined sources1
Binding sitei59MannoseCombined sources1
Binding sitei73MannoseCombined sources1
Binding sitei78MannoseCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

LectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Dimeric mannose specific lectin proteinImported
Gene namesi
Name:LECNPA 7Imported
OrganismiNarcissus hybrid cultivar 2Imported
Taxonomic identifieri89148 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaAsparagalesAmaryllidaceaeAmaryllidoideaeNarcissus

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi5 ↔ 28Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NPLX-ray2.00A1-85[»]
3DZWX-ray1.70A/B1-85[»]
ProteinModelPortaliQ40423.
SMRiQ40423.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ40423.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 85Bulb-type lectinInterPro annotationAdd BLAST85

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni2 – 6Mannose bindingCombined sources5
Regioni10 – 20Mannose bindingCombined sourcesAdd BLAST11
Regioni33 – 37Mannose bindingCombined sources5
Regioni65 – 69Mannose bindingCombined sources5

Family and domain databases

Gene3Di2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
[Graphical view]
SMARTiSM00108. B_lectin. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q40423-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQEDCNLVLY DLDKPIWATN TGGLDRRCHL SMQSDGNLVV YSPRNNPIWA
60 70 80 90 100
SNTGGENGNY VCVLQKDRNV VIYGTARWAT GTNIHGAGIV GVPGSAPQNS
110
TAEMMKLVRK YLITK
Length:115
Mass (Da):12,612
Last modified:November 1, 1996 - v1
Checksum:iCC530373911F27B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M88123 mRNA. Translation: AAA33552.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M88123 mRNA. Translation: AAA33552.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NPLX-ray2.00A1-85[»]
3DZWX-ray1.70A/B1-85[»]
ProteinModelPortaliQ40423.
SMRiQ40423.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ40423.

Family and domain databases

Gene3Di2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
[Graphical view]
SMARTiSM00108. B_lectin. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ40423_9ASPA
AccessioniPrimary (citable) accession number: Q40423
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.