Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

L6

Gene

L6

Organism
Linum usitatissimum (Flax) (Linum humile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defenseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
L6Imported
Gene namesi
Name:L6Imported
OrganismiLinum usitatissimum (Flax) (Linum humile)Imported
Taxonomic identifieri4006 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesLinaceaeLinum

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929Sequence analysisAdd
BLAST
Chaini30 – 12941265Sequence analysisPRO_5004231414Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ40253.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini59 – 199141TIRInterPro annotationAdd
BLAST

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 3 hits.
InterProiIPR032675. L_dom-like.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q40253-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYLREVATA VALLLPFILL NKFWRPNSKD SIVNDDDDST SEVDAISDST
60 70 80 90 100
NPSGSFPSVE YEVFLSFRGP DTREQFTDFL YQSLRRYKIH TFRDDDELLK
110 120 130 140 150
GKEIGPNLLR AIDQSKIYVP IISSGYADSK WCLMELAEIV RRQEEDPRRI
160 170 180 190 200
ILPIFYMVDP SDVRHQTGCY KKAFRKHANK FDGQTIQNWK DALKKVGDLK
210 220 230 240 250
GWHIGKNDKQ GAIADKVSAD IWSHISKENL ILETDELVGI DDHITAVLEK
260 270 280 290 300
LSLDSENVTM VGLYGMGGIG KTTTAKAVYN KISSCFDCCC FIDNIRETQE
310 320 330 340 350
KDGVVVLQKK LVSEILRIDS GSVGFNNDSG GRKTIKERVS RFKILVVLDD
360 370 380 390 400
VDEKFKFEDM LGSPKDFISQ SRFIITSRSM RVLGTLNENQ CKLYEVGSMS
410 420 430 440 450
KPRSLELFSK HAFKKNTPPS YYETLANDVV DTTAGLPLTL KVIGSLLFKQ
460 470 480 490 500
EIAVWEDTLE QLRRTLNLDE VYDRLKISYD ALNPEAKEIF LDIACFFIGQ
510 520 530 540 550
NKEEPYYMWT DCNFYPASNI IFLIQRCMIQ VGDDDEFKMH DQLRDMGREI
560 570 580 590 600
VRREDVLPWK RSRIWSAEEG IDLLLNKKGS SKVKAISIPW GVKYEFKSEC
610 620 630 640 650
FLNLSELRYL HAREAMLTGD FNNLLPNLKW LELPFYKHGE DDPPLTNYTM
660 670 680 690 700
KNLIIVILEH SHITADDWGG WRHMMKMAER LKVVRLASNY SLYGRRVRLS
710 720 730 740 750
DCWRFPKSIE VLSMTAIEMD EVDIGELKKL KTLVLKFCPI QKISGGTFGM
760 770 780 790 800
LKGLRELCLE FNWGTNLREV VADIGQLSSL KVLKTTGAKE VEINEFPLGL
810 820 830 840 850
KELSTSSRIP NLSQLLDLEV LKVYDCKDGF DMPPASPSED ESSVWWKVSK
860 870 880 890 900
LKSLQLEKTR INVNVVDDAS SGGHLPRYLL PTSLTYLKIY QCTEPTWLPG
910 920 930 940 950
IENLENLTSL EVNDIFQTLG GDLDGLQGLR SLEILRIRKV NGLARIKGLK
960 970 980 990 1000
DLLCSSTCKL RKFYITECPD LIELLPCELG GQTVVVPSMA ELTIRDCPRL
1010 1020 1030 1040 1050
EVGPMIRSLP KFPMLKKLDL AVANITKEED LDAIGSLEEL VSLELELDDT
1060 1070 1080 1090 1100
SSGIERIVSS SKLQKLTTLV VKVPSLREIE GLEELKSLQD LYLEGCTSLG
1110 1120 1130 1140 1150
RLPLEKLKEL DIGGCPDLTE LVQTVVAVPS LRGLTIRDCP RLEVGPMIQS
1160 1170 1180 1190 1200
LPKFPMLNEL TLSMVNITKE DELEVLGSLE ELDSLELTLD DTCSSIERIS
1210 1220 1230 1240 1250
FLSKLQKLTT LIVEVPSLRE IEGLAELKSL RILYLEGCTS LERLWPDQQQ
1260 1270 1280 1290
LGSLKNLNVL DIQGCKSLSV DHLSALKTTL PPRARITWPD QPYR
Length:1,294
Mass (Da):146,765
Last modified:November 1, 1996 - v1
Checksum:i802B62800FCA7AE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U27081 Genomic DNA. Translation: AAA91022.1.
PIRiT18546.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U27081 Genomic DNA. Translation: AAA91022.1.
PIRiT18546.

3D structure databases

ProteinModelPortaliQ40253.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 3 hits.
InterProiIPR032675. L_dom-like.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ40253_LINUS
AccessioniPrimary (citable) accession number: Q40253
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 16, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.