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Protein
Submitted name:

Cf-9

Gene

Cf-9

Organism
Solanum pimpinellifolium (Currant tomato) (Lycopersicon pimpinellifolium)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cf-9Imported
Gene namesi
Name:Cf-9Imported
OrganismiSolanum pimpinellifolium (Currant tomato) (Lycopersicon pimpinellifolium)Imported
Taxonomic identifieri4084 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei809 – 83325HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 863842Sequence analysisPRO_5007702783Add
BLAST

Interactioni

Protein-protein interaction databases

MINTiMINT-2838043.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 8657LRRNT_2InterPro annotationAdd
BLAST

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13516. LRR_6. 1 hit.
PF13855. LRR_8. 4 hits.
PF08263. LRRNT_2. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 7 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.

Sequencei

Sequence statusi: Complete.

Q40235-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDCVKLVFLM LYTFLCQLAL SSSLPHLCPE DQALSLLQFK NMFTINPNAS
60 70 80 90 100
DYCYDIRTYV DIQSYPRTLS WNKSTSCCSW DGVHCDETTG QVIALDLRCS
110 120 130 140 150
QLQGKFHSNS SLFQLSNLKR LDLSFNNFTG SLISPKFGEF SNLTHLDLSH
160 170 180 190 200
SSFTGLIPSE ICHLSKLHVL RICDQYGLSL VPYNFELLLK NLTQLRELNL
210 220 230 240 250
ESVNISSTIP SNFSSHLTTL QLSGTELHGI LPERVFHLSN LQSLHLSVNP
260 270 280 290 300
QLTVRFPTTK WNSSASLMTL YVDSVNIADR IPKSFSHLTS LHELYMGRCN
310 320 330 340 350
LSGPIPKPLW NLTNIVFLHL GDNHLEGPIS HFTIFEKLKR LSLVNNNFDG
360 370 380 390 400
GLEFLSFNTQ LERLDLSSNS LTGPIPSNIS GLQNLECLYL SSNHLNGSIP
410 420 430 440 450
SWIFSLPSLV ELDLSNNTFS GKIQEFKSKT LSAVTLKQNK LKGRIPNSLL
460 470 480 490 500
NQKNLQLLLL SHNNISGHIS SAICNLKTLI LLDLGSNNLE GTIPQCVVER
510 520 530 540 550
NEYLSHLDLS KNRLSGTINT TFSVGNILRV ISLHGNKLTG KVPRSMINCK
560 570 580 590 600
YLTLLDLGNN MLNDTFPNWL GYLFQLKILS LRSNKLHGPI KSSGNTNLFM
610 620 630 640 650
GLQILDLSSN GFSGNLPERI LGNLQTMKEI DESTGFPEYI SDPYDIYYNY
660 670 680 690 700
LTTISTKGQD YDSVRILDSN MIINLSKNRF EGHIPSIIGD LVGLRTLNLS
710 720 730 740 750
HNVLEGHIPA SFQNLSVLES LDLSSNKISG EIPQQLASLT FLEVLNLSHN
760 770 780 790 800
HLVGCIPKGK QFDSFGNTSY QGNDGLRGFP LSKLCGGEDQ VTTPAELDQE
810 820 830 840 850
EEEEDSPMIS WQGVLVGYGC GLVIGLSVIY IMWSTQYPAW FSRMDLKLEH
860
IITTKMKKHK KRY
Length:863
Mass (Da):96,570
Last modified:November 1, 1996 - v1
Checksum:iB2140DABD63E5FA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U15936 mRNA. Translation: AAA65235.1.
AJ002236 Genomic DNA. Translation: CAA05274.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U15936 mRNA. Translation: AAA65235.1.
AJ002236 Genomic DNA. Translation: CAA05274.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-2838043.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF13516. LRR_6. 1 hit.
PF13855. LRR_8. 4 hits.
PF08263. LRRNT_2. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 7 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging."
    Jones D.A., Thomas C.M., Hammond-Kosack K.E., Balint-Kurti P.J., Jones J.D.
    Science 266:789-793(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Cf9Imported.
  2. "Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato."
    Parniske M., Hammond-Kosack K.E., Golstein C., Thomas C.M., Jones D.A., Harrison K., Wulff B.B., Jones J.D.
    Cell 91:821-832(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ40235_SOLPI
AccessioniPrimary (citable) accession number: Q40235
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.