Q3ZZV8 (RL9_DEHSC) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L9

Gene names

Name:	rplI
Ordered Locus Names:	cbdbA515

Organism

Dehalococcoides sp. (strain CBDB1) [Complete proteome] [HAMAP]

Taxonomic identifier

255470 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoides

Protein attributes

Sequence length	151 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_00503
Sequence similarities	Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 151	151	50S ribosomal protein L9 HAMAP MF_00503		PRO_0000236516

Sequences

	Sequence		Length	Mass (Da)
	Q3ZZV8 [UniParc]. Last modified September 27, 2005. Version 1. Checksum: EBFD91411E0858E2	FASTA	151	16,529
	10 20 30 40 50 60 MKVVFLKDVP GRGKTGDIKE VNDGYARNYL IPNKLAMPAS AAVKSEIAAK QAAEERRKAK 70 80 90 100 110 120 AEAEMVELAK NLDGAKVNLK AKTGAKDKLY GQITTTVIAA EIEKQTGKTI DKRKLELAEP 130 140 150 IRQLGNYEVV IRFNKDLSSK INLAVTAEEN T

References

[1]

"Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1." Kube M., Beck A., Zinder S.H., Kuhl H., Reinhardt R., Adrian L. Nat. Biotechnol. 23:1269-1273(2005) [PubMed: 16116419] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CBDB1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ965256 Genomic DNA. Translation: CAI82705.1.
RefSeq	YP_307621.1. NC_007356.1.
3D structure databases
ProteinModelPortal	Q3ZZV8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3ZZV8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3623393.
GenomeReviews	Gene locus cbdbA515 in contig AJ965256_GR.
KEGG	deh:cbdb_A515.
NMPDR	fig|255470.3.peg.1069.
PATRIC	21611171. VBIDehSp125902_0431.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0359.
HOGENOM	HBG586587.
OMA	EGFSIGR.
PhylomeDB	Q3ZZV8.
ProtClustDB	PRK00137.
Enzyme and pathway databases
BioCyc	DSP255470:CBDBA515-MONOMER.
Family and domain databases
HAMAP	MF_00503. Ribosomal_L9. [Tree]
InterPro	IPR000244. Ribosomal_L9. IPR009027. Ribosomal_L9/RNase_H1_N. IPR020594. Ribosomal_L9_bac/chp. IPR020069. Ribosomal_L9_C. IPR020070. Ribosomal_L9_N. [Graphical view]
Gene3D	G3DSA:3.10.430.100. Ribosomal_L9. 1 hit. G3DSA:3.40.5.10. Ribosomal_L9. 1 hit.
KO	K02939.
PANTHER	PTHR21368. Ribosomal_L9. 1 hit.
Pfam	PF03948. Ribosomal_L9_C. 1 hit. PF01281. Ribosomal_L9_N. 1 hit. [Graphical view]
SUPFAM	SSF55658. L9_N_like. 1 hit. SSF55653. Ribosomal_L9. 1 hit.
TIGRFAMs	TIGR00158. L9. 1 hit.
PROSITE	PS00651. RIBOSOMAL_L9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL9_DEHSC

Accession

Primary (citable) accession number: Q3ZZV8

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2006
Last sequence update:	September 27, 2005
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program