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Q3ZZB4 (Q3ZZB4_DEHSC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
EC=2.1.1.198 HAMAP MF_01877
Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase HAMAP MF_01877
rRNA (cytidine-2'-O-)-methyltransferase RsmI HAMAP MF_01877
Gene names
Name:rsmI HAMAP MF_01877
Ordered Locus Names:cbdbA331
OrganismDehalococcoides sp. (strain CBDB1) [Complete proteome] [HAMAP]
Taxonomic identifier255470 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoides

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877

Catalytic activity

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877

Subcellular location

Cytoplasm By similarity HAMAP MF_01877.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmI family. HAMAP MF_01877

Ontologies

Keywords
   Biological processrRNA processing HAMAP MF_01877
   Cellular componentCytoplasm HAMAP MF_01877
   LigandS-adenosyl-L-methionine HAMAP MF_01877
   Molecular functionMethyltransferase HAMAP MF_01877 EMBL CAI82552.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processenzyme-directed rRNA 2'-O-methylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionrRNA (cytosine-2'-O-)-methyltransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3ZZB4 [UniParc].

Last modified September 27, 2005. Version 1.
Checksum: E8DA344DAF4F1B9C

FASTA27429,977
        10         20         30         40         50         60 
MALYVVATPI GNLEDITLRA LRLLSEVKLI AAEDTRHTRK LLSAHNIKTP LTSYFEHNRL 

        70         80         90        100        110        120 
SKLDYILEVL MEGDVALVSD AGMPGISDPG YELIKAAHEN GIKVVPVPGA SAVITAVAVS 

       130        140        150        160        170        180 
GLDSGSFSYL GFLPRQKSER RKALSEVEIL GASIVILEAP HRLQGCLLDI KEVLGDRQIS 

       190        200        210        220        230        240 
VCRELTKIYE EIFRGSISQS ISHFSQPRGE FVLVVEGNRQ IPAKPELTGD IISELGLLKK 

       250        260        270 
QGKSAKEAVA LVSQKNGLSK KEIYRAWLKI DKAL

« Hide

References

[1]"Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1."
Kube M., Beck A., Zinder S.H., Kuhl H., Reinhardt R., Adrian L.
Nat. Biotechnol. 23:1269-1273(2005) [PubMed: 16116419] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ965256 Genomic DNA. Translation: CAI82552.1.
RefSeqYP_307468.1. NC_007356.1.

3D structure databases

ProteinModelPortalQ3ZZB4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3ZZB4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3623937.
GenomeReviewsGene locus cbdbA331 in contig AJ965256_GR.
KEGGdeh:cbdb_A331.
NMPDRfig|255470.3.peg.670.
PATRIC21610855. VBIDehSp125902_0274.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0313.
HOGENOMHBG529058.
OMAGREMTKI.
PhylomeDBQ3ZZB4.
ProtClustDBCLSK837512.

Family and domain databases

HAMAPMF_01877. 16SrRNA_methyltr_I.
[Tree]
InterProIPR000878. 4pyrrol_Mease.
IPR014777. 4pyrrole_Mease_sub1.
IPR008189. rRNA_ssu_MeTfrase_I.
IPR018063. SAM_MeTrfase_RsmI_CS.
[Graphical view]
Gene3DG3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
KOK07056.
PANTHERPTHR21091:SF18. PTHR21091:SF18. 1 hit.
PfamPF00590. TP_methylase. 1 hit.
[Graphical view]
PIRSFPIRSF005917. MTase_YraL. 1 hit.
SUPFAMSSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMsTIGR00096. TIGR00096. 1 hit.
PROSITEPS01296. RSMI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3ZZB4_DEHSC
AccessionPrimary (citable) accession number: Q3ZZB4
Entry history
Integrated into UniProtKB/TrEMBL: September 27, 2005
Last sequence update: September 27, 2005
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info