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Q3ZX32 (Q3ZX32_DEHSC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.3.2.4 EMBL CAI82790.1
Gene names
Name:ddl EMBL CAI82790.1
Ordered Locus Names:cbdbA616 EMBL CAI82790.1
OrganismDehalococcoides sp. (strain CBDB1) [Complete proteome] [HAMAP] EMBL CAI82790.1
Taxonomic identifier255470 [NCBI]
Taxonomic lineageBacteriaChloroflexiDehalococcoidiaDehalococcoidalesDehalococcoidaceaeDehalococcoides

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
Q3ZX32 [UniParc].

Last modified September 27, 2005. Version 1.
Checksum: B9B118C4396E8537

FASTA33837,100
        10         20         30         40         50         60 
MRIGLSYDLK LALTPVTGGP DDALEEYDSP ETVEAITNSL TAAGHAVYRL GGGKEFLRKV 

        70         80         90        100        110        120 
QEQKLDLVFN ISEGLGNYRS REAQIPGVLE MLDIPYTGSD PQTLAICLDK PLTKKLVAGA 

       130        140        150        160        170        180 
GVKTAKWQLV SNCEELSTID WSDFPLPAFL KPACEGSSKG VRFASRAEST DEIMRMATEL 

       190        200        210        220        230        240 
LTTYNQPVLV EEFINGDEIT VGVIGNDKPK VLGIMRIVPK TKADYFVYSI EIKRNWRQMV 

       250        260        270        280        290        300 
EYEVPAALPA KTLARIEKAT LDAYRVLECH DLCRMDFRVS PDGTPYFLEV NPLPGLNPVS 

       310        320        330 
GDLPIMASKL GISHADLVLE ILNTAIARHN LVAADCLA 

« Hide

References

[1]"Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1."
Kube M., Beck A., Zinder S.H., Kuhl H., Reinhardt R., Adrian L.
Nat. Biotechnol. 23:1269-1273(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CBDB1 EMBL CAI82790.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ965256 Genomic DNA. Translation: CAI82790.1.
RefSeqYP_307706.1. NC_007356.1.

3D structure databases

ProteinModelPortalQ3ZX32.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING255470.cbdb_A616.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI82790; CAI82790; cbdbA616.
GeneID3623173.
KEGGdeh:cbdb_A616.
PATRIC21611345. VBIDehSp125902_0517.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1181.
KOK01921.
OMAFLEVNPL.
OrthoDBEOG66MQKK.
ProtClustDBCLSK935618.

Enzyme and pathway databases

BioCycDSP255470:GJXW-520-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMSSF52440. SSF52440. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3ZX32_DEHSC
AccessionPrimary (citable) accession number: Q3ZX32
Entry history
Integrated into UniProtKB/TrEMBL: September 27, 2005
Last sequence update: September 27, 2005
Last modified: January 22, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)