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Q3ZX32

- Q3ZX32_DEHMC

UniProt

Q3ZX32 - Q3ZX32_DEHMC

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Protein
Submitted name:

D-ala D-alanine ligase

Gene
ddl, cbdbA616
Organism
Dehalococcoides mccartyi (strain CBDB1)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cell wall formation By similarity.SAAS annotations

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotations

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  2. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationsImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotations, Peptidoglycan synthesisSAAS annotations

Keywords - Ligandi

ATP-bindingSAAS annotations, MagnesiumSAAS annotations, ManganeseSAAS annotations, Metal-bindingSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciDSP255470:GJXW-520-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-ala D-alanine ligaseImported (EC:6.3.2.4Imported)
Gene namesi
Name:ddlImported
Ordered Locus Names:cbdbA616Imported
OrganismiDehalococcoides mccartyi (strain CBDB1)Imported
Taxonomic identifieri255470 [NCBI]
Taxonomic lineageiBacteriaChloroflexiDehalococcoidiaDehalococcoidalesDehalococcoidaceaeDehalococcoides
ProteomesiUP000000433: Chromosome

Subcellular locationi

Cytoplasm By similarity SAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi255470.cbdb_A616.

Structurei

3D structure databases

ProteinModelPortaliQ3ZX32.

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG1181.
KOiK01921.
OMAiFLEVNPL.
OrthoDBiEOG66MQKK.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3ZX32-1 [UniParc]FASTAAdd to Basket

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MRIGLSYDLK LALTPVTGGP DDALEEYDSP ETVEAITNSL TAAGHAVYRL    50
GGGKEFLRKV QEQKLDLVFN ISEGLGNYRS REAQIPGVLE MLDIPYTGSD 100
PQTLAICLDK PLTKKLVAGA GVKTAKWQLV SNCEELSTID WSDFPLPAFL 150
KPACEGSSKG VRFASRAEST DEIMRMATEL LTTYNQPVLV EEFINGDEIT 200
VGVIGNDKPK VLGIMRIVPK TKADYFVYSI EIKRNWRQMV EYEVPAALPA 250
KTLARIEKAT LDAYRVLECH DLCRMDFRVS PDGTPYFLEV NPLPGLNPVS 300
GDLPIMASKL GISHADLVLE ILNTAIARHN LVAADCLA 338
Length:338
Mass (Da):37,100
Last modified:September 27, 2005 - v1
Checksum:iB9B118C4396E8537
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ965256 Genomic DNA. Translation: CAI82790.1.
RefSeqiWP_011309141.1. NC_007356.1.
YP_307706.1. NC_007356.1.

Genome annotation databases

EnsemblBacteriaiCAI82790; CAI82790; cbdbA616.
GeneIDi3623173.
KEGGideh:cbdb_A616.
PATRICi21611345. VBIDehSp125902_0517.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ965256 Genomic DNA. Translation: CAI82790.1 .
RefSeqi WP_011309141.1. NC_007356.1.
YP_307706.1. NC_007356.1.

3D structure databases

ProteinModelPortali Q3ZX32.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 255470.cbdb_A616.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAI82790 ; CAI82790 ; cbdbA616 .
GeneIDi 3623173.
KEGGi deh:cbdb_A616.
PATRICi 21611345. VBIDehSp125902_0517.

Phylogenomic databases

eggNOGi COG1181.
KOi K01921.
OMAi FLEVNPL.
OrthoDBi EOG66MQKK.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci DSP255470:GJXW-520-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1."
    Kube M., Beck A., Zinder S.H., Kuhl H., Reinhardt R., Adrian L.
    Nat. Biotechnol. 23:1269-1273(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CBDB1Imported.

Entry informationi

Entry nameiQ3ZX32_DEHMC
AccessioniPrimary (citable) accession number: Q3ZX32
Entry historyi
Integrated into UniProtKB/TrEMBL: September 27, 2005
Last sequence update: September 27, 2005
Last modified: September 3, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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