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Protein

Transcription factor SPT20 homolog-like 1

Gene

SUPT20HL1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciZFISH:G66-33435-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor SPT20 homolog-like 1
Gene namesi
Name:SUPT20HL1
Synonyms:FAM48B1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:30773. SUPT20HL1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Polymorphism and mutation databases

DMDMi205831478.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003444591 – 823Transcription factor SPT20 homolog-like 1Add BLAST823

Proteomic databases

EPDiQ3ZLR7.
PeptideAtlasiQ3ZLR7.
PRIDEiQ3ZLR7.

PTM databases

iPTMnetiQ3ZLR7.
PhosphoSitePlusiQ3ZLR7.

Expressioni

Gene expression databases

CleanExiHS_FAM48B1.

Structurei

3D structure databases

ProteinModelPortaliQ3ZLR7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi624 – 812Gln-richAdd BLAST189

Sequence similaritiesi

Belongs to the SPT20 family.Curated

Phylogenomic databases

HOVERGENiHBG081509.
InParanoidiQ3ZLR7.
PhylomeDBiQ3ZLR7.

Family and domain databases

InterProiIPR021950. Spt20.
[Graphical view]
PANTHERiPTHR13526. PTHR13526. 2 hits.
PfamiPF12090. Spt20. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3ZLR7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRDLEQALD RAENIIEIAQ QRPPRRRYSP RAGKTLQEKL YDIYVEECGK
60 70 80 90 100
EPEDPQELRS NVNLLEKLVR RESLPCLLVN LYPGNQGYSV MLQREDGSFA
110 120 130 140 150
ETIRLPYEER ALLDYLDAEE LPPALGDVLD KASVNIFHSG CVIVEVRDYR
160 170 180 190 200
QSSNMQPPGY QSRHILLRPT MQTLAHDVKM MTRDGQKWSQ EDKLQLESQL
210 220 230 240 250
ILATAEPLCL DPSVAVACTA NRLLYNKQKM NTDPMKRCLQ RYSWPSVKPQ
260 270 280 290 300
QEQSDCPPPP ELRVSTSGQK EERKVGQPCE LNIAKAGSCV DTWKGRPCDL
310 320 330 340 350
AVPSEVDVEK LAKGYQSVTA ADPQLPVWPA QEVEDPFGFA LEAGCQAWDT
360 370 380 390 400
KPSIMQSFND PLLCGKIRPR KKARQKSQKS PWQPFPDDHS ACLRPGSETD
410 420 430 440 450
AGRAVSQAQE SVQSKVKGPG KMSHSSSGPA SVSQLSSWKT PEQPDPVWVQ
460 470 480 490 500
SSVSGKGEKH PPPRTQLPSS SGKISSGNSF PPQQAGSPLK PAAPAAAASA
510 520 530 540 550
APSHSQKPSV PLIQASRPCP AAQPPTKFIK IAPAIQLRTG STGLKAINVE
560 570 580 590 600
GPVQGAQALG SSFKPVQAPG SGAPAPAGIS GSDLQSSGGP LPDARPGAVQ
610 620 630 640 650
ASSPAPLQFF LNTPEGLRPL TLLQVPQGSA VLTGPQQQSH QLVSLQQLQQ
660 670 680 690 700
PTAAHPPQPG PQGSALGLST QGQAFPAQQL LKVNPTRARS GLQPQPQPAV
710 720 730 740 750
LSLLGSAQVP QQGVQLPSVL RQQQPQPQPP KLQLQPQWQP KPRQEQPQSQ
760 770 780 790 800
QQQPQHIQLQ TQQLRVLQQP QHIQLQTQQL RVLQQPVFLA TGAVQIVQPH
810 820
PGVQVGSQLV DQRKEGKPTP PAP
Length:823
Mass (Da):89,431
Last modified:July 22, 2008 - v2
Checksum:i767D015784918F10
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004552 Genomic DNA. No translation available.
AY736017 mRNA. Translation: AAW59547.1.
UniGeneiHs.717243.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004552 Genomic DNA. No translation available.
AY736017 mRNA. Translation: AAW59547.1.
UniGeneiHs.717243.

3D structure databases

ProteinModelPortaliQ3ZLR7.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

iPTMnetiQ3ZLR7.
PhosphoSitePlusiQ3ZLR7.

Polymorphism and mutation databases

DMDMi205831478.

Proteomic databases

EPDiQ3ZLR7.
PeptideAtlasiQ3ZLR7.
PRIDEiQ3ZLR7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiSUPT20HL1.
HGNCiHGNC:30773. SUPT20HL1.
neXtProtiNX_Q3ZLR7.
GenAtlasiSearch...

Phylogenomic databases

HOVERGENiHBG081509.
InParanoidiQ3ZLR7.
PhylomeDBiQ3ZLR7.

Enzyme and pathway databases

BioCyciZFISH:G66-33435-MONOMER.

Miscellaneous databases

PROiQ3ZLR7.

Gene expression databases

CleanExiHS_FAM48B1.

Family and domain databases

InterProiIPR021950. Spt20.
[Graphical view]
PANTHERiPTHR13526. PTHR13526. 2 hits.
PfamiPF12090. Spt20. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSP201_HUMAN
AccessioniPrimary (citable) accession number: Q3ZLR7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 2, 2016
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.