Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q3ZE13 (RPP30_DICDI) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease P protein subunit drpp30

EC=3.1.26.5
Alternative name(s):
RNaseP protein 1
Gene names
Name:drpp30
Synonyms:rpp1, rpp30
ORF Names:DDB_G0269980
OrganismDictyostelium discoideum (Slime mold) [Reference proteome]
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity.

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

Subcellular location

Nucleus Potential.

Sequence similarities

Belongs to the eukaryotic/archaeal RNase P protein component 3 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 366366Ribonuclease P protein subunit drpp30
PRO_0000240431

Regions

Compositional bias285 – 34763Thr-rich

Sequences

Sequence LengthMass (Da)Tools
Q3ZE13 [UniParc].

Last modified May 2, 2006. Version 1.
Checksum: 7E9B6A63EF8FB09C

FASTA36640,745
        10         20         30         40         50         60 
MVYYDLNIDS SLPEPKIKSM LSLHTKYGYD SVAITHTVEG KIGYKDVCKI KKIQIEDDSE 

        70         80         90        100        110        120 
KSTSSGWMKM GDSNKTIKQY TRLQVICKTM AEFQMITANN PVVQSYDIIS VVPYDVSVFN 

       130        140        150        160        170        180 
AACNSNEIDI ITIDTFSKFI IKPERVRQCI AKGIFIEILY GNLFGIDADR IAFFQIASSL 

       190        200        210        220        230        240 
VRSSFGKNII LSSSGKSSTT LRSPYDLSNL GHLFGLTFDQ AKAAVSKHPH TAVLHAITRR 

       250        260        270        280        290        300 
TKGIATVTDP NLLKDLELWK LERKEDTQPT NNNIPHEKHI NKESTGKETI PKPTTTTTTT 

       310        320        330        340        350        360 
TTTTTTAKTK TPTPTPTTEK TPSIPTQPPQ KPTAKSNKKT TTNTTSTAQK QGKMDIDIDN 


NKRKRE 

« Hide

References

« Hide 'large scale' references
[1]"Cloning and characterization of drpp1."
Vourekas A., Kalavrizioti D., Zarkadis I.K., Stathopoulos C., Drainas D.
Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: AX4.
[2]"The genome of the social amoeba Dictyostelium discoideum."
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. expand/collapse author list , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY940192 mRNA. Translation: AAY18218.1.
AAFI02000005 Genomic DNA. Translation: EAL72340.1.
RefSeqXP_646444.1. XM_641352.1.

3D structure databases

ProteinModelPortalQ3ZE13.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING44689.DDB_0232069.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsDDB0232069; DDB0232069; DDB_G0269980.
GeneID8617403.
KEGGddi:DDB_G0269980.

Organism-specific databases

dictyBaseDDB_G0269980. drpp30.

Phylogenomic databases

eggNOGNOG273171.
KOK03539.
OMAVICKTMA.

Family and domain databases

InterProIPR016195. Pol/histidinol_Pase-like.
IPR002738. RNase_P_p30.
[Graphical view]
PANTHERPTHR13031. PTHR13031. 1 hit.
PfamPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMSSF89550. SSF89550. 2 hits.
ProtoNetSearch...

Other

PROQ3ZE13.

Entry information

Entry nameRPP30_DICDI
AccessionPrimary (citable) accession number: Q3ZE13
Secondary accession number(s): Q55CN7
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: May 2, 2006
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Dictyostelium discoideum

Dictyostelium discoideum: entries, gene names and cross-references to dictyBase