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Q3ZCJ7 (TBA1C_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Tubulin alpha-1C chain
Gene names
Name:TUBA1C
OrganismBos taurus (Bovine)
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain By similarity.

Subunit structure

Dimer of alpha and beta chains By similarity.

Subcellular location

Cytoplasm › cytoskeleton By similarity.

Post-translational modification

Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively By similarity.

Some glutamate residues at the C-terminus are either polyglutamylated or polyglycylated. These 2 modifications occur exclusively on glutamate residues and result in either polyglutamate or polyglycine chains on the gamma-carboxyl group. Glycylation is mainly limited to tubulin incorporated into axonemes (cilia and flagella) whereas glutamylation is prevalent in neuronal cells, centrioles, axonemes, and the mitotic spindle. Both modifications can coexist on the same protein on adjacent residues, and lowering polyglycylation levels increases polyglutamylation, and reciprocally. The precise function of such modifications is still unclear but they are regulate the assembly and dynamics of axonemal microtubules By similarity.

Acetylation of alpha-tubulins at Lys-40 stabilizes microtubules and affects affinity and processivity of microtubule motors. This modification has a role in multiple cellular functions, ranging from cell motility, cell cycle progression or cell differentiation to intracellular trafficking and signaling By similarity.

Sequence similarities

Belongs to the tubulin family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 449449Tubulin alpha-1C chain
PRO_0000288842

Regions

Nucleotide binding142 – 1487GTP Potential

Sites

Site4491Involved in polymerization By similarity

Amino acid modifications

Modified residue401N6-acetyllysine By similarity
Modified residue411Phosphothreonine By similarity
Modified residue511Phosphothreonine By similarity
Modified residue1121N6-acetyllysine By similarity
Modified residue3341Phosphothreonine By similarity
Modified residue4321Phosphotyrosine By similarity
Modified residue4391Phosphoserine By similarity

Secondary structure

1 ........................................................ 449
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q3ZCJ7 [UniParc].

Last modified September 27, 2005. Version 1.
Checksum: F3FDF02BEC1B61C9

FASTA44949,857
        10         20         30         40         50         60 
MRECISIHVG QAGVQIGNAC WELYCLEHGI QPDGQMPSDK TIGGGDDSFN TFFSETGAGK 

        70         80         90        100        110        120 
HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLISGKEDAA NNYARGHYTI GKEIIDLVLD 

       130        140        150        160        170        180 
RVRKLADQCT GLQGFLVFHS FGGGTGSGFT SLLMERLSVD YGKKSKLEFS IYPAPQVSTA 

       190        200        210        220        230        240 
VVEPYNSILT THTTLEHSDC AFMVDNEAIY DICRRNLDIE RPTYTNLNRL MSQIVSSITA 

       250        260        270        280        290        300 
SLRFDGALNV DLTEFQTNLV PYPRIHFPLA TYAPVISAEK AYHEQLSVAE ITNACFEPAN 

       310        320        330        340        350        360 
QMVKCDPRHG KYMACCLLYR GDVVPKDVNA AIATIKTKRT IQFVDWCPTG FKVGINYQPP 

       370        380        390        400        410        420 
TVVPGGDLAK VQRAVCMLSN TTAVAEAWAR LDHKFDLMYA KRAFVHWYVG EGMEEGEFSE 

       430        440 
AREDMAALEK DYEEVGADSA EGDDEGDEY

« Hide

References

[1]NIH - Mammalian Gene Collection (MGC) project
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Crossbred X Angus.
Tissue: Ileum.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC102116 mRNA. Translation: AAI02117.1.
IPIIPI00704614.
RefSeqNP_001029376.1. NM_001034204.1.
UniGeneBt.53573.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3DU7X-ray4.10A/C1-449[»]
3E22X-ray3.80A/C1-449[»]
ProteinModelPortalQ3ZCJ7.
SMRQ3ZCJ7. Positions 1-439.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3ZCJ7.

Proteomic databases

PRIDEQ3ZCJ7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000038370; ENSBTAP00000038184; ENSBTAG00000039992.
GeneID504244.
KEGGbta:504244.

Organism-specific databases

CTD84790.

Phylogenomic databases

eggNOGmaNOG08063.
HOVERGENHBG000089.
InParanoidQ3ZCJ7.
OMAIEPDGTM.
OrthoDBEOG44J2HZ.
PhylomeDBQ3ZCJ7.

Family and domain databases

InterProIPR002452. Alpha_tubulin.
IPR008280. Tub_FtsZ_C.
IPR000217. Tubulin.
IPR018316. Tubulin/FtsZ_2-layer-sand-dom.
IPR023123. Tubulin_C.
IPR017975. Tubulin_CS.
IPR003008. Tubulin_FtsZ_GTPase.
[Graphical view]
Gene3DG3DSA:3.30.1330.20. Tubulin/FtsZ_2-layer-sand-dom. 1 hit.
G3DSA:1.10.287.600. Tubulin_C. 1 hit.
G3DSA:3.40.50.1440. Tubulin_FtsZ. 1 hit.
KOK07374.
PANTHERPTHR11588. Tubulin. 1 hit.
PfamPF00091. Tubulin. 1 hit.
PF03953. Tubulin_C. 1 hit.
[Graphical view]
PRINTSPR01162. ALPHATUBULIN.
PR01161. TUBULIN.
SMARTSM00864. Tubulin. 1 hit.
SM00865. Tubulin_C. 1 hit.
[Graphical view]
SUPFAMSSF55307. Tub_FtsZ_C. 1 hit.
SSF52490. Tubulin_FtsZ. 1 hit.
PROSITEPS00227. TUBULIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTBA1C_BOVIN
AccessionPrimary (citable) accession number: Q3ZCJ7
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: September 27, 2005
Last modified: November 16, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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