Q3ZB87 (Q3ZB87_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SATB2 protein EMBL AAI03493.1

Submitted name:
Uncharacterized protein Ensembl ENSP00000388581

Gene names

Name:

SATB2 EMBL AAI03493.1 Ensembl ENSP00000388581

Organism

Homo sapiens (Human) EMBL AAI03493.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	615 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000682
Domain	Homeobox RuleBase RU000682
Ligand	DNA-binding RuleBase RU000682
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	cytoplasm Inferred from direct assay. Source: HPA nucleus Inferred from direct assay. Source: HPA
Molecular function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3ZB87 [UniParc]. Last modified September 27, 2005. Version 1. Checksum: 8A4F3998CF207015	FASTA	615	69,137
	10 20 30 40 50 60 MERRSESPCL RDSPDRRSGS PDVKGPPPVK VARLEQNGSP MGARGRPNGA VAKAVGGLMI 70 80 90 100 110 120 PVFCVVEQLD GSLEYDNREE HAEFVLVRKD VLFSQLVETA LLALGYSHSS AAQAQVERVE 130 140 150 160 170 180 RENLSDYCVL GQRPMHLPNM NQLASLGKTN EQSPHSQIHH STPIRNQVPA LQPIMSPGLL 190 200 210 220 230 240 SPQLSPQLVR QQIAMAHLIN QQIAVSRLLA HQHPQAINQQ FLNHPPIPRA VKPEPTNSSV 250 260 270 280 290 300 EVSPDIYQQV RDELKRASVS QAVFARVAFN RTQGLLSEIL RKEEDPRTAS QSLLVNLRAM 310 320 330 340 350 360 QNFLNLPEVE RDRIYQDERE RSMNPNVSMV SSASSSPSSS RTPQAKTSTP TTDLPIKVDG 370 380 390 400 410 420 ANINITAAIY DEIQQEMKRA KVSQALFAKV AANKSQGWLC ELLRWKENPS PENRTLWENL 430 440 450 460 470 480 CTIRRFLNLP QHERDVIYEE ESRHHHSERM QHVVQLPPEP VQVLHRQQSQ PAKESSPPRE 490 500 510 520 530 540 EAPPPPPPTE DSCAKKPRSR TKISLEALGI LQSFIHDVGL YPDQEAIHTL SAQLDLPKHT 550 560 570 580 590 600 IIKFFQNQRY HVKHHGKLKE HLGSAVDVAE YKDEELLTES EENDSEEGSE EMYKVEAEEE 610 NADKSKAAPA EIDQR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K. Nature 434:724-731(2005) [PubMed: 15815621] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescued clones EMBL AAI03493.1.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC016746 Genomic DNA. No translation available. AC017096 Genomic DNA. No translation available. BC103492 mRNA. Translation: AAI03493.1.
IPI	IPI00651702.
UniGene	Hs.516617.
3D structure databases
ProteinModelPortal	Q3ZB87.
SMR	Q3ZB87. Positions 232-319, 355-556.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3ZB87.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000428695; ENSP00000388581; ENSG00000119042.
UCSC	uc010fsq.1. human.
Organism-specific databases
HGNC	HGNC:21637. SATB2.
GenAtlas	Search...
Phylogenomic databases
eggNOG	prNOG18417.
GeneTree	ENSGT00390000008096.
HOVERGEN	HBG054240.
Gene expression databases
ArrayExpress	Q3ZB87.
Bgee	Q3ZB87.
Family and domain databases
InterPro	IPR003350. Hmoeo_CUT. IPR001356. Homeobox. IPR009057. Homeodomain-like. IPR012287. Homeodomain-rel. IPR010982. Lambda_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.260.40. G3DSA:1.10.260.40. 2 hits. G3DSA:1.10.10.60. Homeodomain-rel. 1 hit.
Pfam	PF02376. CUT. 2 hits. PF00046. Homeobox. 1 hit. [Graphical view]
SMART	SM00389. HOX. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit. SSF47413. Lambda_like_DNA. 2 hits.
PROSITE	PS51042. CUT. 2 hits. PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3ZB87_HUMAN

Accession

Primary (citable) accession number: Q3ZB87

Entry history

Integrated into UniProtKB/TrEMBL:	September 27, 2005
Last sequence update:	September 27, 2005
Last modified:	September 21, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.