Reviewed,
UniProtKB/Swiss-Prot Q3Z782 (GCH1_DEHE1)
Last modified
June 16, 2009.
Version 28.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: GTP cyclohydrolase 1 EC=3.5.4.16 Alternative name(s): GTP cyclohydrolase I Short name=GTP-CH-I | ||||
| Gene names |
| ||||
| Organism | Dehalococcoides ethenogenes (strain 195) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 243164 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoides |
Protein attributes
| Sequence length | 189 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | GTP + H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate. HAMAP MF_00223 |
| Pathway | Cofactor biosynthesis; dihydroneopterin triphosphate biosynthesis; 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate from GTP: step 1/1. HAMAP MF_00223 |
| Subunit structure | Toroid-shaped homodecamer, composed of two pentamers of five dimers By similarity. |
| Sequence similarities | Belongs to the GTP cyclohydrolase I family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | One-carbon metabolism |
| Ligand | GTP-binding Metal-binding Nucleotide-binding Zinc |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | one-carbon compound metabolic process Inferred from electronic annotation. Source: HAMAP tetrahydrofolate biosynthetic processInferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular function | GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTP cyclohydrolase I activityInferred from electronic annotation. Source: HAMAP zinc ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 189 | 189 | GTP cyclohydrolase 1 HAMAP MF_00223 | PRO_1000043687 | |||||
Sites | |||||||||
| Metal binding | 76 | 1 | Zinc By similarity | ||||||
| Metal binding | 79 | 1 | Zinc By similarity | ||||||
| Metal binding | 149 | 1 | Zinc By similarity | ||||||
Sequences
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References
| [1] | "Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes." Seshadri R., Adrian L., Fouts D.E., Eisen J.A., Phillippy A.M., Methe B.A., Ward N.L., Nelson W.C., DeBoy R.T., Khouri H.M., Kolonay J.F., Dodson R.J., Daugherty S.C., Brinkac L.M., Sullivan S.A., Madupu R., Nelson K.E., Kang K.H. Heidelberg J.F.Science 307:105-108(2005) [PubMed: 15637277] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| CP000027 Genomic DNA. Translation: AAW39542.1. | |
| RefSeq | YP_181917.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 3229503. |
| GenomeReviews | Gene locus DET1204 in contig CP000027_GR. |
| KEGG | det:DET1204. |
| NMPDR | fig|243164.3.peg.1106. |
| TIGR | DET1204. |
Phylogenomic databases | |
| HOGENOM | Q3Z782. |
| OMA | Q3Z782. ARIVEMF. |
Enzyme and pathway databases | |
| BioCyc | DETH243164:DET_1204-MON. |
Family and domain databases | |
| HAMAP | MF_00223. [Tree] |
| InterPro | IPR001474. GTP_CycHdrlase_I. IPR018234. GTP_CycHdrlase_I_CS. [Graphical view] |
| PANTHER | PTHR11109. GTP_cyclohydro_I. 1 hit. |
| Pfam | PF01227. GTP_cyclohydroI. 1 hit. [Graphical view] |
| ProDom | PD003330. GTP_cyclohydroI. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| TIGRFAMs | TIGR00063. folE. 1 hit. |
| PROSITE | PS00859. GTP_CYCLOHYDROL_1_1. 1 hit. PS00860. GTP_CYCLOHYDROL_1_2. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | GCH1_DEHE1 | ||||||||
| Accession | Primary (citable) accession number: Q3Z782 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


