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Q3Z6U5 (Q3Z6U5_DEHE1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Tryptophan--tRNA ligase HAMAP-Rule MF_00140

EC=6.1.1.2 HAMAP-Rule MF_00140
Alternative name(s):
Tryptophanyl-tRNA synthetase HAMAP-Rule MF_00140
Gene names
Name:trpS HAMAP-Rule MF_00140 EMBL AAW39427.1
Ordered Locus Names:DET1343 EMBL AAW39427.1
OrganismDehalococcoides ethenogenes (strain 195) [Complete proteome] [HAMAP] EMBL AAW39427.1
Taxonomic identifier243164 [NCBI]
Taxonomic lineageBacteriaChloroflexiDehalococcoidiaDehalococcoidalesDehalococcoidaceaeDehalococcoides

Protein attributes

Sequence length323 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophyl-tRNA(Trp). SAAS SAAS024109 HAMAP-Rule MF_00140

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00140

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00140.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489 HAMAP-Rule MF_00140

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif10 – 189"HIGH" region By similarity HAMAP-Rule MF_00140
Motif191 – 1955"KMSKS" region By similarity HAMAP-Rule MF_00140

Sites

Binding site1941ATP By similarity HAMAP-Rule MF_00140

Sequences

Sequence LengthMass (Da)Tools
Q3Z6U5 [UniParc].

Last modified September 27, 2005. Version 1.
Checksum: CB2767D599C79F1E

FASTA32336,514
        10         20         30         40         50         60 
MKRVFSGVRP TGRLHLGNYL GAVKNYVALQ DDYECIYCVV DIHALTTLEE TDALKENIYE 

        70         80         90        100        110        120 
MMLDLLASGL DPKKCILFVQ SQVPEINELF TLFGMITPLS WLLRVPTFKE KVRMHPDNVN 

       130        140        150        160        170        180 
YGLVGYPVLQ AADISLYKAD LVPVGVDQLP HLELTREIVR RFNEKFGDTF PEAQARLTNF 

       190        200        210        220        230        240 
PTVVGLDGKD KMSKSLNNHI ELALSEEETA KKVMSAVTDP ARQYKTDPGH PDICNVYKLH 

       250        260        270        280        290        300 
NYFSPQAVAQ IADDCRNARI GCVQCKRALA EAINVYLRPI RAKRSKLAEN PDEIYRIMAD 

       310        320 
GAERAGAIAR ETIDEVRRKM NLR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000027 Genomic DNA. Translation: AAW39427.1.
RefSeqYP_182054.1. NC_002936.3.

3D structure databases

ProteinModelPortalQ3Z6U5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243164.DET1343.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAW39427; AAW39427; DET1343.
GeneID3229387.
KEGGdet:DET1343.
PATRIC21609715. VBIDehEth89364_1272.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0180.
HOGENOMHOG000059941.
KOK01867.
OMAYGYGHAK.
OrthoDBEOG686NJQ.
ProtClustDBPRK00927.

Enzyme and pathway databases

BioCycDETH243164:GJNF-1344-MONOMER.

Family and domain databases

Gene3D3.40.50.620. 1 hit.
HAMAPMF_00140_B. Trp_tRNA_synth_B.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
IPR024109. Trp-tRNA-ligase_bac-type.
[Graphical view]
PANTHERPTHR10055. PTHR10055. 1 hit.
PfamPF00579. tRNA-synt_1b. 1 hit.
[Graphical view]
PRINTSPR01039. TRNASYNTHTRP.
TIGRFAMsTIGR00233. trpS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3Z6U5_DEHE1
AccessionPrimary (citable) accession number: Q3Z6U5
Entry history
Integrated into UniProtKB/TrEMBL: September 27, 2005
Last sequence update: September 27, 2005
Last modified: April 16, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)