Q3Z1L9 (Q3Z1L9_SHISS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit EMBL AAZ88343.1

Gene names

Name:	fdnH EMBL AAZ88343.1
Ordered Locus Names:	SSON_1649 EMBL AAZ88343.1

Organism

Shigella sonnei (strain Ss046) [Complete proteome] [HAMAP] EMBL AAZ88343.1

Taxonomic identifier

300269 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella › Shigella sonnei

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cellular respiration Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	electron carrier activity Inferred from electronic annotation. Source: InterPro formate dehydrogenase (NAD+) activity Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3Z1L9 [UniParc]. Last modified September 27, 2005. Version 1. Checksum: 43E91D587CDB5540	FASTA	294	32,265
	10 20 30 40 50 60 MAMETQDIIK RSATNSITPP SQVRDYKAEV AKLIDVSTCI GCKACQVACS EWNDIRDEVG 70 80 90 100 110 120 HCVGVYDNPA DLSAKSWTVM RFSETEQNGK LEWLIRKDGC MHCEDPGCLK ACPSAGAIIQ 130 140 150 160 170 180 YANGIVDFQS ENCIGCGYCI AGCPFNIPRL NKEDNRVYKC TLCVDRVSVG QEPACVKTCP 190 200 210 220 230 240 TGAIHFGTKK EMLELAEERV AKLKARGYEH AGVYNPKGVG GTHVMYVLHH ADQPELYYGL 250 260 270 280 290 PKDPKIDTSV SLWKGALKPL AAAGFIATFA GLIFHYIGIG PNKEVDDDEE DHHE

References

[1]

"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery." Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ss046 EMBL AAZ88343.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000038 Genomic DNA. Translation: AAZ88343.1.
RefSeq	YP_310578.1. NC_007384.1.
3D structure databases
ProteinModelPortal	Q3Z1L9.
SMR	Q3Z1L9. Positions 2-290.
ModBase	Search...
Protein-protein interaction databases
STRING	300269.SSON_1649.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ88343; AAZ88343; SSON_1649.
GeneID	3666989.
KEGG	ssn:SSON_1649.
PATRIC	18737256. VBIShiSon107113_1976.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0437.
HOGENOM	HOG000163382.
KO	K08349.
OMA	PRARDYK.
ProtClustDB	CLSK2393194.
Enzyme and pathway databases
BioCyc	SSON300269:GJJF-1645-MONOMER.
Family and domain databases
InterPro	IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR006470. Formate_DH_bsu. IPR014603. Formate_DH_Fe-S_su. IPR015246. Formate_DH_TM. [Graphical view]
Pfam	PF13247. Fer4_11. 1 hit. PF12797. Fer4_2. 1 hit. PF09163. Form-deh_trans. 1 hit. [Graphical view]
PIRSF	PIRSF036298. FDH_4Fe4S. 1 hit.
TIGRFAMs	TIGR01582. FDH-beta. 1 hit.
PROSITE	PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 4 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3Z1L9_SHISS

Accession

Primary (citable) accession number: Q3Z1L9

Entry history

Integrated into UniProtKB/TrEMBL:	September 27, 2005
Last sequence update:	September 27, 2005
Last modified:	May 29, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)