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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Shigella sonnei (strain Ss046)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi104Calcium 1UniRule annotation1
Metal bindingi198Calcium 1UniRule annotation1
Metal bindingi206Calcium 2UniRule annotation1
Active sitei235NucleophileUniRule annotation1
Metal bindingi239Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei265Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:SSON_1983Imported
OrganismiShigella sonnei (strain Ss046)Imported
Taxonomic identifieri300269 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000002529 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ3Z0R3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 402AamyInterPro annotationAdd BLAST399

Phylogenomic databases

HOGENOMiHOG000094847
KOiK01176
OMAiVLNHKMG

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR013776 A-amylase_thermo
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02806 Alpha-amylase_C, 1 hit
PIRSFiPIRSF001021 Alph-amls_thrmst, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

Q3Z0R3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG
60 70 80 90 100
GYSVGYDSYD LFDLGEFDQK GSIPTKYGDK AQLLAAIDAL KRNDIAVLLD
110 120 130 140 150
VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY
160 170 180 190 200
SQFIWDFKCF SGIDHIENPD EDGIFKIVND YTGEGWNDQV DDELGNFDYL
210 220 230 240 250
MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE
260 270 280 290 300
HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS
310 320 330 340 350
RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL
360 370 380 390 400
AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL
410 420 430 440 450
ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG
460 470 480 490
ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVI
Length:495
Mass (Da):56,586
Last modified:September 27, 2005 - v1
Checksum:i26BD74E87F49C4D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000038 Genomic DNA Translation: AAZ88649.1

Genome annotation databases

EnsemblBacteriaiAAZ88649; AAZ88649; SSON_1983
KEGGissn:SSON_1983

Similar proteinsi

Entry informationi

Entry nameiQ3Z0R3_SHISS
AccessioniPrimary (citable) accession number: Q3Z0R3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 27, 2005
Last sequence update: September 27, 2005
Last modified: March 28, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health