Q3YYJ5 (Q3YYJ5_SHISS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase activity EMBL AAZ89417.1

Gene names

Name:	gabT EMBL AAZ89417.1
Ordered Locus Names:	SSON_2806 EMBL AAZ89417.1

Organism

Shigella sonnei (strain Ss046) [Complete proteome] [HAMAP] EMBL AAZ89417.1

Taxonomic identifier

300269 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella › Shigella sonnei

Protein attributes

Sequence length	426 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL AAZ89417.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3YYJ5 [UniParc]. Last modified September 27, 2005. Version 1. Checksum: 3F96575FFFD7CE5C	FASTA	426	45,697
	10 20 30 40 50 60 MNSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP 70 80 90 100 110 120 KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK 130 140 150 160 170 180 IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE 190 200 210 220 230 240 DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAASPA FMQRLRALCD EHGIMLIADE 250 260 270 280 290 300 VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG 310 320 330 340 350 360 NPIACVAALE VLKVFEHENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF 370 380 390 400 410 420 EDGDHSKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC FAEAKQ

References

[1]

"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery." Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ss046 EMBL AAZ89417.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000038 Genomic DNA. Translation: AAZ89417.1.
RefSeq	YP_311652.1. NC_007384.1.
3D structure databases
ProteinModelPortal	Q3YYJ5.
SMR	Q3YYJ5. Positions 2-426.
ModBase	Search...
Protein-protein interaction databases
STRING	300269.SSON_2806.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ89417; AAZ89417; SSON_2806.
GeneID	3666937.
KEGG	ssn:SSON_2806.
PATRIC	18740076. VBIShiSon107113_3353.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K07250.
OMA	EAIASIH.
ProtClustDB	PRK08088.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3YYJ5_SHISS

Accession

Primary (citable) accession number: Q3YYJ5

Entry history

Integrated into UniProtKB/TrEMBL:	September 27, 2005
Last sequence update:	September 27, 2005
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)