Q3YXQ2 (Q3YXQ2_SHISS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative isomerase EMBL AAZ89710.1

Gene names

Name:	ygjK EMBL AAZ89710.1
Ordered Locus Names:	SSON_3125

Organism

Shigella sonnei (strain Ss046) [Complete proteome] [HAMAP]

Taxonomic identifier

300269 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella

Protein attributes

Sequence length	783 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL AAZ89710.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	trehalose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha,alpha-trehalase activity Inferred from electronic annotation. Source: InterPro isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3YXQ2 [UniParc]. Last modified September 27, 2005. Version 1. Checksum: 59110EDD3E5598CC	FASTA	783	88,273
	10 20 30 40 50 60 MKIKTILTPV TCALLISFSA HAANADNYKN VINRTGAPQY MKDYDYDDHQ RFNPFFDLGA 70 80 90 100 110 120 WHGHLLPDGP NTMGGFPGVA LLTEEYINFM ASNFDRLTVW QDGKKVDFTL EAYSIPGALV 130 140 150 160 170 180 QKLTAKDVQV EMTLRFATPR TSLLETKITS NKPLDLVWDG ELLEKLEAKE GKPLSDKTIA 190 200 210 220 230 240 GEYPDYQRKI SATRDGLKVT FGKVRATWDL LTSGESEYQV HKSLPVQTEI NGNRFTSKAH 250 260 270 280 290 300 INGSTTLYTT YSHLLTAQEV SKEQMQIRDI LARPAFYLTA SQQRWEEYLK KGLTNPDATP 310 320 330 340 350 360 EQTRVAVKAI ETLNGNWLSP GGAVKFNTVT PSVTGRWFSG NQTWPWDTWK QAFAMAHFNP 370 380 390 400 410 420 DIAKENIRAV FSWQIQPGDS VRPQDVGFVP DLIAWNLSPE RGGDGGNWNE RNTKPSLAAW 430 440 450 460 470 480 SVMEVYNVTQ DKAWLAEMYP KLVAYHDWWL RNRDHNGNGV PEYGATRDKA HNTESGEMLF 490 500 510 520 530 540 TVKKGDKEET QSGLNNYARV VEKGLYDSLE IPAQVAASWE SGRDDAAVFG FIDKEQLDKY 550 560 570 580 590 600 VANGGKRSDW TVKFAENRSQ DGTLLGYSLL QESVDQASYM YSDNHYLAEM ATILGKPEEA 610 620 630 640 650 660 KRYRQLAQQL ADYINTCMFD PTTQFYYDVR IEDKPLANGC AGKPIVERGK GPEGWLPLFN 670 680 690 700 710 720 GAATQANADA VVKVMLDPKE FNTFVPLGTA ALTNPAFGAD IYWRGRVWVD QFWFGLKGME 730 740 750 760 770 780 RYGYRDDALK LADTFFRHAK GLTADGPIQE NYNPLTGAQQ GAPNFSWSAA HLYMLYNDFF RKQ

References

[1]

"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery." Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q. Nucleic Acids Res. 33:6445-6458(2005) [PubMed: 16275786] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000038 Genomic DNA. Translation: AAZ89710.1.
RefSeq	YP_311945.1. NC_007384.1.
3D structure databases
ProteinModelPortal	Q3YXQ2.
SMR	Q3YXQ2. Positions 25-782.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3YXQ2.
Protein family/group databases
CAZy	GH63. Glycoside Hydrolase Family 63.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000100933; EBESCP00000096962; EBESCG00000099977.
GeneID	3669457.
GenomeReviews	Gene locus SSON_3125 in contig CP000038_GR.
KEGG	ssn:SSON_3125.
PATRIC	18740821. VBIShiSon107113_3715.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG16503.
GeneTree	EBGT00050000010499.
HOGENOM	HBG467323.
OMA	VAVKAME.
PhylomeDB	Q3YXQ2.
ProtClustDB	PRK10137.
Enzyme and pathway databases
BioCyc	SSON300269:SSO_3125-MONOMER.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR001661. Glyco_hydro_37. [Graphical view]
KO	K03931.
Pfam	PF01204. Trehalase. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3YXQ2_SHISS

Accession

Primary (citable) accession number: Q3YXQ2

Entry history

Integrated into UniProtKB/TrEMBL:	September 27, 2005
Last sequence update:	September 27, 2005
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)