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Q3Y185

- Q3Y185_ENTFC

UniProt

Q3Y185 - Q3Y185_ENTFC

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Protein
Submitted name:

ErfK/YbiS/YcfS/YnhG

Gene
EfaeDRAFT_1610, HMPREF0351_12555
Organism
Enterococcus faecium DO
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei421 – 4211Sulfate 2Imported
Binding sitei440 – 4401Sulfate 2; via amide nitrogenImported
Binding sitei444 – 4441Sulfate 2Imported

GO - Molecular functioni

  1. transferase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciEFAE333849:GLCV-2634-MONOMER.

Protein family/group databases

MEROPSiC82.001.

Names & Taxonomyi

Protein namesi
Submitted name:
ErfK/YbiS/YcfS/YnhGImported
Submitted name:
ErfK/YbiS/YcfS/YnhG family proteinImported
Gene namesi
ORF Names:EfaeDRAFT_1610Imported, HMPREF0351_12555Imported
OrganismiEnterococcus faecium DOImported
Taxonomic identifieri333849 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesEnterococcaceaeEnterococcus
ProteomesiUP000005269: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3333 PredictedImportedAdd
BLAST
Chaini34 – 466433 PredictedImportedPRO_5000006814Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZATX-ray2.40A217-466[»]
2HKLX-ray2.60A/B/C217-466[»]
3ZG4NMR-A341-465[»]
3ZGPNMR-A341-466[»]

Miscellaneous databases

EvolutionaryTraceiQ3Y185.

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

InterProiIPR005490. LD_TPept_cat_dom.
IPR022029. PG_binding_4.
[Graphical view]
PfamiPF12229. PG_binding_4. 2 hits.
PF03734. YkuD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q3Y185-1 [UniParc]FASTAAdd to Basket

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MTRSSHRKKS KHVALLSVLG VLLVLISFYT YRSTYYTKHF LPNTEINGIN    50
VSNLTVEKAN EKLKEAYSDK KLAIKEDGKV WQEVPKSELG YKDDFTSELS 100
PILNEQNGWT WGMTYVSAAE KQEIDPVSQN HQKLDTTVQT LTTKLTDLNK 150
DRTPTTDATI EKAGDSFVIK PEVNGNTIDV DAAVKQLKSA VNSGKDTIEL 200
TEFKEKPKVT SEDSSLKEQL ASMNAIANVK ATYSINGETF QIPSSDIMSW 250
LTYNDGKVDL DTEQVRQYVT DLGTKYNTST NDTKFKSTKR GEVTVPVGTY 300
SWTIQTDSET EALKKAILAG QDFTRSPIVQ GGTTADHPLI EDTYIEVDLE 350
NQHMWYYKDG KVALETDIVS GKPTTPTPAG VFYVWNKEED ATLKGTNDDG 400
TPYESPVNYW MPIDWTGVGI HDSDWQPEYG GDLWKTRGSH GCINTPPSVM 450
KELFGMVEKG TPVLVF 466
Length:466
Mass (Da):52,056
Last modified:October 11, 2005 - v1
Checksum:i86336B131FB6E1E1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003583 Genomic DNA. Translation: AFK60179.1.
AAAK03000012 Genomic DNA. Translation: EAN10258.1.
RefSeqiYP_006377161.1. NC_017960.1.

Genome annotation databases

EnsemblBacteriaiAFK60179; AFK60179; HMPREF0351_12555.
EAN10258; EAN10258; EfaeDRAFT_1610.
GeneIDi13001293.
KEGGiefu:HMPREF0351_12555.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003583 Genomic DNA. Translation: AFK60179.1 .
AAAK03000012 Genomic DNA. Translation: EAN10258.1 .
RefSeqi YP_006377161.1. NC_017960.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1ZAT X-ray 2.40 A 217-466 [» ]
2HKL X-ray 2.60 A/B/C 217-466 [» ]
3ZG4 NMR - A 341-465 [» ]
3ZGP NMR - A 341-466 [» ]
ModBasei Search...
MobiDBi Search...

Protein family/group databases

MEROPSi C82.001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFK60179 ; AFK60179 ; HMPREF0351_12555 .
EAN10258 ; EAN10258 ; EfaeDRAFT_1610 .
GeneIDi 13001293.
KEGGi efu:HMPREF0351_12555.

Enzyme and pathway databases

BioCyci EFAE333849:GLCV-2634-MONOMER.

Miscellaneous databases

EvolutionaryTracei Q3Y185.

Family and domain databases

InterProi IPR005490. LD_TPept_cat_dom.
IPR022029. PG_binding_4.
[Graphical view ]
Pfami PF12229. PG_binding_4. 2 hits.
PF03734. YkuD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. DOE Joint Genome Institute
    Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOImported.
  2. "Annotation of the draft genome assembly of Enterococcus faecium DO."
    US DOE Joint Genome Institute (JGI-ORNL)
    Larimer F., Land M.
    Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOImported.
  3. "Sequencing of the draft genome and assembly of Enterococcus faecium DO."
    US DOE Joint Genome Institute (JGI-PGF)
    Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P.
    Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOImported.
  4. "Crystal structure of a novel beta-lactam-insensitive peptidoglycan transpeptidase."
    Biarrotte-Sorin S., Hugonnet J.E., Delfosse V., Mainardi J.L., Gutmann L., Arthur M., Mayer C.
    J. Mol. Biol. 359:533-538(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 217-466.
  5. "Crystal structure of Enterococcus faecium L,D-transpeptidase C442S mutant."
    Delfosse V., Hugonnet J.-E., Magnet S., Mainardi J.-L., Arthur M., Mayer C.
    Submitted (JUL-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 217-466.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DOImported.
  7. "Structure of Enterococcus faeciuml,d-transpeptidase acylated by ertapenem provides insight into the inactivation mechanism."
    Lecoq L., Dubee V., Triboulet S., Bougault C., Hugonnet J.E., Arthur M., Simorre J.P.
    ACS Chem. Biol. 8:1140-1146(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 341-466.

Entry informationi

Entry nameiQ3Y185_ENTFC
AccessioniPrimary (citable) accession number: Q3Y185
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 3, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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