Q3Y080 (Q3Y080_ENTFC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL EAN09880.1
EC=4.1.1.15 EMBL AFK57885.1

Gene names

Name:	gadB EMBL AFK57885.1
ORF Names:	EfaeDRAFT_1317 EMBL EAN09880.1, HMPREF0351_10261 EMBL AFK57885.1

Organism

Enterococcus faecium DO EMBL EAN09880.1

Taxonomic identifier

333849 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus › Enterococcus faecium

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL AFK57885.1
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3Y080 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: E7D3C84E398A0624	FASTA	466	53,715
	10 20 30 40 50 60 MLYGKDNQEE KNYLEPIFGS ASEDVDLPKY KLNKESIEPR IAYQLVQDEM LDEGNARLNL 70 80 90 100 110 120 ATFCQTYMEP EAVKLMTQTL EKNAIDKSEY PRTTEIENRC VNMIADLWHA PNNEKFMGTS 130 140 150 160 170 180 TIGSSEACML GGMAMKFAWR KRAEKLGLDI QAKKPNLVIS SGYQVCWEKF CVYWDVELRE 190 200 210 220 230 240 VPMDEKHMSI NLDTVMDYVD EYTIGIVGIM GITYTGRYDD IKGLNDLVEA HNKQTDYKVY 250 260 270 280 290 300 IHVDAASGGF YAPFTEPDLV WDFQLKNVIS INSSGHKYGL VYPGVGWVLW RDQQYLPEEL 310 320 330 340 350 360 VFKVSYLGGE MPTMAINFSH SAAQLIGQYY NFVRYGFDGY RDIHQRTHDV AVYLAKEIEK 370 380 390 400 410 420 TGIFEIINDG SELPVVCYKL KEDPNREWTL YDLSDRLLMK GWQVPAYPLP KDLDQLIIQR 430 440 450 460 LVVRADFGMN MAGDYVQDMN QAIEELNKAH IVYHKKQDVK TYGFTH

References

[1]	DOE Joint Genome Institute Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DO EMBL EAN09880.1.
[2]	"Annotation of the draft genome assembly of Enterococcus faecium DO." US DOE Joint Genome Institute (JGI-ORNL) Larimer F., Land M. Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DO EMBL EAN09880.1.
[3]	"Sequencing of the draft genome and assembly of Enterococcus faecium DO." US DOE Joint Genome Institute (JGI-PGF) Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P. Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DO EMBL EAN09880.1.
[4]	"Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes." Qin X., Galloway-Pena J.R., Sillanpaa J., Hyeob Roh J., Nallapareddy S.R., Chowdhury S., Bourgogne A., Choudhury T., Munzy D.M., Buhay C.J., Ding Y., Dugan-Rocha S., Liu W., Kovar C., Sodergren E., Highlander S., Petrosino J.F., Worley K.C. , Gibbs R.A., Weinstock G.M., Murray B.E. BMC Microbiol. 12:135-135(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: DO EMBL AFK57885.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003583 Genomic DNA. Translation: AFK57885.1. AAAK03000022 Genomic DNA. Translation: EAN09880.1.
RefSeq	YP_006374867.1. NC_017960.1.
3D structure databases
ProteinModelPortal	Q3Y080.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFK57885; AFK57885; HMPREF0351_10261. EAN09880; EAN09880; EfaeDRAFT_1317.
GeneID	12998920.
KEGG	efu:HMPREF0351_10261.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3Y080_ENTFC

Accession

Primary (citable) accession number: Q3Y080

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	April 3, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)