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Q3Y080 (Q3Y080_ENTFC) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AFK57885.1
Gene names
Name:gadB EMBL AFK57885.1
ORF Names:EfaeDRAFT_1317 EMBL EAN09880.1, HMPREF0351_10261 EMBL AFK57885.1
OrganismEnterococcus faecium DO [Complete proteome] EMBL EAN09880.1
Taxonomic identifier333849 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesEnterococcaceaeEnterococcus

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q3Y080 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: E7D3C84E398A0624

FASTA46653,715
        10         20         30         40         50         60 
MLYGKDNQEE KNYLEPIFGS ASEDVDLPKY KLNKESIEPR IAYQLVQDEM LDEGNARLNL 

        70         80         90        100        110        120 
ATFCQTYMEP EAVKLMTQTL EKNAIDKSEY PRTTEIENRC VNMIADLWHA PNNEKFMGTS 

       130        140        150        160        170        180 
TIGSSEACML GGMAMKFAWR KRAEKLGLDI QAKKPNLVIS SGYQVCWEKF CVYWDVELRE 

       190        200        210        220        230        240 
VPMDEKHMSI NLDTVMDYVD EYTIGIVGIM GITYTGRYDD IKGLNDLVEA HNKQTDYKVY 

       250        260        270        280        290        300 
IHVDAASGGF YAPFTEPDLV WDFQLKNVIS INSSGHKYGL VYPGVGWVLW RDQQYLPEEL 

       310        320        330        340        350        360 
VFKVSYLGGE MPTMAINFSH SAAQLIGQYY NFVRYGFDGY RDIHQRTHDV AVYLAKEIEK 

       370        380        390        400        410        420 
TGIFEIINDG SELPVVCYKL KEDPNREWTL YDLSDRLLMK GWQVPAYPLP KDLDQLIIQR 

       430        440        450        460 
LVVRADFGMN MAGDYVQDMN QAIEELNKAH IVYHKKQDVK TYGFTH 

« Hide

References

[1]DOE Joint Genome Institute
Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DO EMBL EAN09880.1.
[2]"Annotation of the draft genome assembly of Enterococcus faecium DO."
US DOE Joint Genome Institute (JGI-ORNL)
Larimer F., Land M.
Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DO EMBL EAN09880.1.
[3]"Sequencing of the draft genome and assembly of Enterococcus faecium DO."
US DOE Joint Genome Institute (JGI-PGF)
Copeland A., Lucas S., Lapidus A., Barry K., Detter C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P.
Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DO EMBL EAN09880.1.
[4]"Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes."
Qin X., Galloway-Pena J.R., Sillanpaa J., Hyeob Roh J., Nallapareddy S.R., Chowdhury S., Bourgogne A., Choudhury T., Munzy D.M., Buhay C.J., Ding Y., Dugan-Rocha S., Liu W., Kovar C., Sodergren E., Highlander S., Petrosino J.F., Worley K.C. expand/collapse author list , Gibbs R.A., Weinstock G.M., Murray B.E.
BMC Microbiol. 12:135-135(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DO EMBL AFK57885.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003583 Genomic DNA. Translation: AFK57885.1.
AAAK03000022 Genomic DNA. Translation: EAN09880.1.
RefSeqYP_006374867.1. NC_017960.1.

3D structure databases

ProteinModelPortalQ3Y080.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFK57885; AFK57885; HMPREF0351_10261.
EAN09880; EAN09880; EfaeDRAFT_1317.
GeneID12998920.
KEGGefu:HMPREF0351_10261.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycEFAE333849:GLCV-261-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3Y080_ENTFC
AccessionPrimary (citable) accession number: Q3Y080
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 11, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)