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Q3V3N7

- Q3V3N7_MOUSE

UniProt

Q3V3N7 - Q3V3N7_MOUSE

Protein
Submitted name:

Protein Bbs1

Gene

Bbs1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphoprotein binding Source: MGI
    2. protein binding Source: ParkinsonsUK-UCL
    3. receptor binding Source: BHF-UCL

    GO - Biological processi

    1. adult behavior Source: MGI
    2. brain morphogenesis Source: MGI
    3. cartilage development Source: MGI
    4. cellular lipid metabolic process Source: MGI
    5. cerebral cortex development Source: MGI
    6. cilium assembly Source: BHF-UCL
    7. cilium morphogenesis Source: BHF-UCL
    8. dendrite development Source: MGI
    9. fat cell differentiation Source: BHF-UCL
    10. fertilization Source: MGI
    11. Golgi to plasma membrane protein transport Source: MGI
    12. hippocampus development Source: MGI
    13. hormone metabolic process Source: MGI
    14. intraciliary retrograde transport Source: MGI
    15. microtubule cytoskeleton organization Source: MGI
    16. multicellular organism growth Source: MGI
    17. neuron migration Source: MGI
    18. nonmotile primary cilium assembly Source: MGI
    19. olfactory behavior Source: MGI
    20. photoreceptor cell morphogenesis Source: MGI
    21. protein localization Source: MGI
    22. protein localization to cilium Source: MGI
    23. regulation of cilium beat frequency involved in ciliary motility Source: BHF-UCL
    24. retina homeostasis Source: MGI
    25. sensory perception of smell Source: MGI
    26. striatum development Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Bbs1Imported
    Gene namesi
    Name:Bbs1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 19

    Organism-specific databases

    MGIiMGI:1277215. Bbs1.

    Subcellular locationi

    GO - Cellular componenti

    1. BBSome Source: MGI
    2. centrosome Source: MGI
    3. ciliary basal body Source: MGI
    4. motile cilium Source: BHF-UCL

    Expressioni

    Gene expression databases

    GenevestigatoriQ3V3N7.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000005232.
    HOGENOMiHOG000260890.
    HOVERGENiHBG045407.
    InParanoidiQ3V3N7.
    KOiK16746.
    OMAiHAPDAVT.
    OrthoDBiEOG75XGKF.
    TreeFamiTF312892.

    Family and domain databases

    InterProiIPR028784. BBS1.
    IPR011047. Quinonprotein_ADH-like_supfam.
    [Graphical view]
    PANTHERiPTHR20870:SF0. PTHR20870:SF0. 1 hit.
    SUPFAMiSSF50998. SSF50998. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q3V3N7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAASSSDSD SGRAESNEAN SKWLDAHYDP MANIHTFSSC LSLADLHGDG    50
    EYKLVVGDLG PGGQQPRLKV LKGPTVLTES PLPALPASAA TFLMDQHEPR 100
    TPALALASGP CVYVYKNLRP YFKFSLPQLP PNPLEQDVWN QAKEDQIDPL 150
    TLKEMLEDIR EKADVPLSVQ SLRFLQLELS EMEAFVNQHK SKVIKRQTVI 200
    TTMTTLKKNL ADEDAASCLV LGTESKELLV LDPEAFTILA KMSLPSVPVF 250
    LEVSGQFDVE FRLTAACRNG SIYILRRDSK HPKYCIELSA QPVGLVRVHK 300
    VLVVGSTQES LHGFTHKGKK LWTVQMPAAI LTMNLLEQRS RGLQAVMAAL 350
    ANGEVRIYRD KALLNVIHAP DAVTSLCFGR YGREDNTLIM TTRGGGLIIK 400
    ILKRTAVFVE GTGEVGPPLA QTTKLSVPRK TRLYVDQTLR EREAGTAMHR 450
    TFQTDLYLLR LRAARAYVQA LESSLSPMST TAREPLKLHA VVQGLGPTFK 500
    LTLHLQNTST ARPVLGLHVC FLYNKALYAL PQAFFKVPLL VPGLSYPLET 550
    FVESLSSKGI SDMIKVLVLR EGQSAPLLSA HINMPVSEGL AAA 593
    Length:593
    Mass (Da):65,094
    Last modified:October 11, 2005 - v1
    Checksum:i322E9DD4DD554813
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC141437 Genomic DNA. No translation available.
    AK037753 mRNA. Translation: BAE20519.1.
    RefSeqiNP_001028300.1. NM_001033128.3.
    UniGeneiMm.23636.

    Genome annotation databases

    EnsembliENSMUST00000053506; ENSMUSP00000055321; ENSMUSG00000006464.
    GeneIDi52028.
    KEGGimmu:52028.
    UCSCiuc008gbk.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC141437 Genomic DNA. No translation available.
    AK037753 mRNA. Translation: BAE20519.1 .
    RefSeqi NP_001028300.1. NM_001033128.3.
    UniGenei Mm.23636.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000053506 ; ENSMUSP00000055321 ; ENSMUSG00000006464 .
    GeneIDi 52028.
    KEGGi mmu:52028.
    UCSCi uc008gbk.2. mouse.

    Organism-specific databases

    CTDi 582.
    MGIi MGI:1277215. Bbs1.

    Phylogenomic databases

    GeneTreei ENSGT00390000005232.
    HOGENOMi HOG000260890.
    HOVERGENi HBG045407.
    InParanoidi Q3V3N7.
    KOi K16746.
    OMAi HAPDAVT.
    OrthoDBi EOG75XGKF.
    TreeFami TF312892.

    Miscellaneous databases

    NextBioi 308396.
    PROi Q3V3N7.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3V3N7.

    Family and domain databases

    InterProi IPR028784. BBS1.
    IPR011047. Quinonprotein_ADH-like_supfam.
    [Graphical view ]
    PANTHERi PTHR20870:SF0. PTHR20870:SF0. 1 hit.
    SUPFAMi SSF50998. SSF50998. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3V3N7_MOUSE
    AccessioniPrimary (citable) accession number: Q3V3N7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3