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Q3V3N7

- Q3V3N7_MOUSE

UniProt

Q3V3N7 - Q3V3N7_MOUSE

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Protein
Submitted name:

Protein Bbs1

Gene
Bbs1
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. phosphoprotein binding Source: MGI
  2. protein binding Source: ParkinsonsUK-UCL
  3. receptor binding Source: BHF-UCL

GO - Biological processi

  1. adult behavior Source: MGI
  2. brain morphogenesis Source: MGI
  3. cartilage development Source: MGI
  4. cellular lipid metabolic process Source: MGI
  5. cerebral cortex development Source: MGI
  6. cilium assembly Source: BHF-UCL
  7. cilium morphogenesis Source: BHF-UCL
  8. dendrite development Source: MGI
  9. fat cell differentiation Source: BHF-UCL
  10. fertilization Source: MGI
  11. Golgi to plasma membrane protein transport Source: MGI
  12. hippocampus development Source: MGI
  13. hormone metabolic process Source: MGI
  14. intraciliary retrograde transport Source: MGI
  15. microtubule cytoskeleton organization Source: MGI
  16. multicellular organism growth Source: MGI
  17. neuron migration Source: MGI
  18. nonmotile primary cilium assembly Source: MGI
  19. olfactory behavior Source: MGI
  20. photoreceptor cell morphogenesis Source: MGI
  21. protein localization Source: MGI
  22. protein localization to cilium Source: MGI
  23. regulation of cilium beat frequency involved in ciliary motility Source: BHF-UCL
  24. retina homeostasis Source: MGI
  25. sensory perception of smell Source: MGI
  26. striatum development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Bbs1Imported
Gene namesi
Name:Bbs1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 19

Organism-specific databases

MGIiMGI:1277215. Bbs1.

Subcellular locationi

GO - Cellular componenti

  1. BBSome Source: MGI
  2. centrosome Source: MGI
  3. ciliary basal body Source: MGI
  4. motile cilium Source: BHF-UCL
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ3V3N7.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000005232.
HOGENOMiHOG000260890.
HOVERGENiHBG045407.
InParanoidiQ3V3N7.
KOiK16746.
OMAiHAPDAVT.
OrthoDBiEOG75XGKF.
TreeFamiTF312892.

Family and domain databases

InterProiIPR028784. BBS1.
IPR011047. Quinonprotein_ADH-like_supfam.
[Graphical view]
PANTHERiPTHR20870:SF0. PTHR20870:SF0. 1 hit.
SUPFAMiSSF50998. SSF50998. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3V3N7-1 [UniParc]FASTAAdd to Basket

« Hide

MAAASSSDSD SGRAESNEAN SKWLDAHYDP MANIHTFSSC LSLADLHGDG    50
EYKLVVGDLG PGGQQPRLKV LKGPTVLTES PLPALPASAA TFLMDQHEPR 100
TPALALASGP CVYVYKNLRP YFKFSLPQLP PNPLEQDVWN QAKEDQIDPL 150
TLKEMLEDIR EKADVPLSVQ SLRFLQLELS EMEAFVNQHK SKVIKRQTVI 200
TTMTTLKKNL ADEDAASCLV LGTESKELLV LDPEAFTILA KMSLPSVPVF 250
LEVSGQFDVE FRLTAACRNG SIYILRRDSK HPKYCIELSA QPVGLVRVHK 300
VLVVGSTQES LHGFTHKGKK LWTVQMPAAI LTMNLLEQRS RGLQAVMAAL 350
ANGEVRIYRD KALLNVIHAP DAVTSLCFGR YGREDNTLIM TTRGGGLIIK 400
ILKRTAVFVE GTGEVGPPLA QTTKLSVPRK TRLYVDQTLR EREAGTAMHR 450
TFQTDLYLLR LRAARAYVQA LESSLSPMST TAREPLKLHA VVQGLGPTFK 500
LTLHLQNTST ARPVLGLHVC FLYNKALYAL PQAFFKVPLL VPGLSYPLET 550
FVESLSSKGI SDMIKVLVLR EGQSAPLLSA HINMPVSEGL AAA 593
Length:593
Mass (Da):65,094
Last modified:October 11, 2005 - v1
Checksum:i322E9DD4DD554813
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC141437 Genomic DNA. No translation available.
AK037753 mRNA. Translation: BAE20519.1.
RefSeqiNP_001028300.1. NM_001033128.3.
UniGeneiMm.23636.

Genome annotation databases

EnsembliENSMUST00000053506; ENSMUSP00000055321; ENSMUSG00000006464.
GeneIDi52028.
KEGGimmu:52028.
UCSCiuc008gbk.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC141437 Genomic DNA. No translation available.
AK037753 mRNA. Translation: BAE20519.1 .
RefSeqi NP_001028300.1. NM_001033128.3.
UniGenei Mm.23636.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000053506 ; ENSMUSP00000055321 ; ENSMUSG00000006464 .
GeneIDi 52028.
KEGGi mmu:52028.
UCSCi uc008gbk.2. mouse.

Organism-specific databases

CTDi 582.
MGIi MGI:1277215. Bbs1.

Phylogenomic databases

GeneTreei ENSGT00390000005232.
HOGENOMi HOG000260890.
HOVERGENi HBG045407.
InParanoidi Q3V3N7.
KOi K16746.
OMAi HAPDAVT.
OrthoDBi EOG75XGKF.
TreeFami TF312892.

Miscellaneous databases

NextBioi 308396.
PROi Q3V3N7.
SOURCEi Search...

Gene expression databases

Genevestigatori Q3V3N7.

Family and domain databases

InterProi IPR028784. BBS1.
IPR011047. Quinonprotein_ADH-like_supfam.
[Graphical view ]
PANTHERi PTHR20870:SF0. PTHR20870:SF0. 1 hit.
SUPFAMi SSF50998. SSF50998. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  6. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3V3N7_MOUSE
AccessioniPrimary (citable) accession number: Q3V3N7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 3, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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