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Protein
Submitted name:

Putative uncharacterized protein

Gene

Sox2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi1 – 60HMG boxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Sox2Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98364. Sox2.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

PTM / Processingi

Proteomic databases

PaxDbiQ3V2B6.
PeptideAtlasiQ3V2B6.

Expressioni

Gene expression databases

BgeeiENSMUSG00000074637.
GenevisibleiQ3V2B6. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000096755.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 60HMG box DNA-bindingInterPro annotationAdd BLAST60

Phylogenomic databases

eggNOGiENOG410IPZI. Eukaryota.
ENOG411009V. LUCA.
HOVERGENiHBG105663.

Family and domain databases

Gene3Di1.10.30.10. 1 hit.
InterProiView protein in InterPro
IPR009071. HMG_box_dom.
IPR032643. SOX-2.
IPR022097. SOX_fam.
PANTHERiPTHR10270:SF267. PTHR10270:SF267. 1 hit.
PfamiView protein in Pfam
PF00505. HMG_box. 1 hit.
PF12336. SOXp. 1 hit.
SMARTiView protein in SMART
SM00398. HMG. 1 hit.
SUPFAMiSSF47095. SSF47095. 1 hit.
PROSITEiView protein in PROSITE
PS50118. HMG_BOX_2. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q3V2B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VWSRGQRRKM AQENPKMHNS EISKRLGAEW KLLSETEKRP FIDEAKRLRA
60 70 80 90 100
LHMKEHPDYK YRPRRKTKTL MKKDKYTLPG GLLAPGGNSM ASGVGVGAGL
110 120 130 140 150
GAGVNQRMDS YAHMNGWSNG SYSMMQEQLG YPQHPGLNAH GAAQMQPMHR
160 170 180 190 200
YDVSALQYNS MTSSQTYMNG SPTYSMSYSQ QGTPGMALGS MGSVVKSEAS
210 220 230 240 250
SSPPVVTSSS HSRAPCQAGD LRDMISMYLP GAEVPEPAAP SRLHMAQHYQ
260
SGPVPGTAIN GTLPLSHM
Length:268
Mass (Da):29,242
Last modified:October 11, 2005 - v1
Checksum:i0EF4FF360C71E87C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK131933 mRNA. Translation: BAE20882.1.
UniGeneiMm.65396.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK131933 mRNA. Translation: BAE20882.1.
UniGeneiMm.65396.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000096755.

Proteomic databases

PaxDbiQ3V2B6.
PeptideAtlasiQ3V2B6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:98364. Sox2.

Phylogenomic databases

eggNOGiENOG410IPZI. Eukaryota.
ENOG411009V. LUCA.
HOVERGENiHBG105663.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000074637.
GenevisibleiQ3V2B6. MM.

Family and domain databases

Gene3Di1.10.30.10. 1 hit.
InterProiView protein in InterPro
IPR009071. HMG_box_dom.
IPR032643. SOX-2.
IPR022097. SOX_fam.
PANTHERiPTHR10270:SF267. PTHR10270:SF267. 1 hit.
PfamiView protein in Pfam
PF00505. HMG_box. 1 hit.
PF12336. SOXp. 1 hit.
SMARTiView protein in SMART
SM00398. HMG. 1 hit.
SUPFAMiSSF47095. SSF47095. 1 hit.
PROSITEiView protein in PROSITE
PS50118. HMG_BOX_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ3V2B6_MOUSE
AccessioniPrimary (citable) accession number: Q3V2B6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: February 15, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.