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Protein
Submitted name:

Telomeric repeat-binding factor 1

Gene

Terf1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Telomeric repeat-binding factor 1Imported
Gene namesi
Name:Terf1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 1

Organism-specific databases

MGIiMGI:109634. Terf1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini333 – 390HTH myb-type DNA-bindingInterPro annotationAdd BLAST58

Phylogenomic databases

GeneTreeiENSGT00530000063796.
HOGENOMiHOG000132847.
HOVERGENiHBG054097.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.25.40.210. 2 hits.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR001005. SANT/Myb.
IPR013867. Telomere_rpt-bd_fac_dimer_dom.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
PF08558. TRF. 2 hits.
[Graphical view]
ProDomiPD014243. Telomere_repeat-bd_fac_dimer. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF63600. SSF63600. 1 hit.
PROSITEiPS51294. HTH_MYB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3V252-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETVSSAAR DAPSREGWTD SDSPEQEEVG DDAELLQCQL QLGTPREMEN
60 70 80 90 100
AELVAEVEAV AAGWMLDFLC LSLCRAFRDG RSEDFRRTRD SAEAIIHGLH
110 120 130 140 150
RLTAYQLKTV YICQFLTRVA SGKALDAQFE VDERITPLES ALMIWNSIEK
160 170 180 190 200
EHDKLHDEIK NLIKIQPLER KLLKIISQKD VFHSLFQHFS YSCMMEKIQS
210 220 230 240 250
YVGDVLSEKS STFLMKAATK VVENEKARTQ ASKDRPDATN TGMDTEVGLN
260 270 280 290 300
KEKSVNGQQS TETEPLVDTV SSIRSHKNAL SQLKHRRAPS DFSRNEARTG
310 320 330 340 350
TLQCETTMER NRRTSGRNRL CVSENQPDTD DKSGRRKRQT WLWEEDRILK
360 370 380 390
CGVKKYGEGN WAKILSHYKF NNRTSVMLKD RWRTMKRLKL IS
Length:392
Mass (Da):44,927
Last modified:October 11, 2005 - v1
Checksum:i36192D3FEA65AEB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109269 Genomic DNA. No translation available.
AK132022 mRNA. Translation: BAE20947.1.
RefSeqiNP_001273557.1. NM_001286628.1.
UniGeneiMm.4306.

Genome annotation databases

EnsembliENSMUST00000027057; ENSMUSP00000027057; ENSMUSG00000025925.
GeneIDi21749.
UCSCiuc007aji.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109269 Genomic DNA. No translation available.
AK132022 mRNA. Translation: BAE20947.1.
RefSeqiNP_001273557.1. NM_001286628.1.
UniGeneiMm.4306.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000027057; ENSMUSP00000027057; ENSMUSG00000025925.
GeneIDi21749.
UCSCiuc007aji.2. mouse.

Organism-specific databases

CTDi7013.
MGIiMGI:109634. Terf1.

Phylogenomic databases

GeneTreeiENSGT00530000063796.
HOGENOMiHOG000132847.
HOVERGENiHBG054097.

Miscellaneous databases

ChiTaRSiTerf1. mouse.
SOURCEiSearch...

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.25.40.210. 2 hits.
InterProiIPR009057. Homeodomain-like.
IPR017930. Myb_dom.
IPR001005. SANT/Myb.
IPR013867. Telomere_rpt-bd_fac_dimer_dom.
[Graphical view]
PfamiPF00249. Myb_DNA-binding. 1 hit.
PF08558. TRF. 2 hits.
[Graphical view]
ProDomiPD014243. Telomere_repeat-bd_fac_dimer. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00717. SANT. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF63600. SSF63600. 1 hit.
PROSITEiPS51294. HTH_MYB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3V252_MOUSE
AccessioniPrimary (citable) accession number: Q3V252
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.