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Q3V1Q8 (Q3V1Q8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Foxg1 MGI 1347464
OrganismMus musculus (Mouse)
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity SAAS SAAS001766.

Sequence similarities

Contains fork-head DNA-binding domain. SAAS SAAS001766

Ontologies

Keywords
   Biological processTranscription
Transcription regulation SAAS SAAS001766
   Cellular componentNucleus SAAS SAAS001766
   LigandDNA-binding SAAS SAAS001766
Gene Ontology (GO)
   Biological_processaging

Inferred from electronic annotation. Source: Ensembl

axon midline choice point recognition

Inferred from mutant phenotype PubMed 15240555. Source: MGI

cell morphogenesis involved in neuron differentiation

Inferred from mutant phenotype PubMed 16691564. Source: MGI

central nervous system neuron development

Inferred from mutant phenotype PubMed 16680166. Source: MGI

cerebral cortex development

Inferred from direct assay PubMed 22726835. Source: MGI

dorsal/ventral pattern formation

Inferred from mutant phenotype PubMed 14566948PubMed 15893304. Source: MGI

forebrain development

Inferred from mutant phenotype PubMed 12151532PubMed 14566948PubMed 14704420PubMed 7605629. Source: MGI

inner ear morphogenesis

Inferred from mutant phenotype PubMed 16691564. Source: MGI

negative regulation of neuron differentiation

Inferred from mutant phenotype PubMed 12151532PubMed 14704420PubMed 7605629. Source: MGI

negative regulation of transcription, DNA-templated

Inferred from electronic annotation. Source: Ensembl

neurogenesis

Inferred from direct assay PubMed 18184563. Source: MGI

neuron fate determination

Inferred from direct assay PubMed 22726835. Source: MGI

positive regulation of cell cycle

Inferred from mutant phenotype PubMed 15893304. Source: MGI

positive regulation of neuroblast proliferation

Inferred from mutant phenotype PubMed 15893304. Source: MGI

pyramidal neuron migration

Inferred from direct assay PubMed 22726835. Source: MGI

regulation of cell cycle

Inferred from direct assay PubMed 22726835. Source: MGI

regulation of gene expression

Inferred from mutant phenotype PubMed 22726835. Source: MGI

regulation of mitotic cell cycle

Inferred from mutant phenotype PubMed 12151532. Source: MGI

regulation of neural precursor cell proliferation

Inferred from genetic interaction PubMed 22516202. Source: MGI

transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentnucleus

Inferred from direct assay PubMed 18842901. Source: MGI

   Molecular_functionsequence-specific DNA binding

Inferred from electronic annotation. Source: InterPro

sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3V1Q8 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: FF6786C3513AB452

FASTA48151,625
        10         20         30         40         50         60 
MLDMGDRKEV KMIPKSSFSI NSLVPEAVQN DNHHASHGHH NSHHPQHHHH HHHHHHPPPP 

        70         80         90        100        110        120 
APQPPPPPPQ QQQQQPPPAP QPPQARGAPA ADDDKGPQPL LLPPSTALDG AKADALGAKG 

       130        140        150        160        170        180 
EPGGGPAELA PVGPDEKEKG AGAGGEEKKG AGEGGKDGEG GKEGDKKNGK YEKPPFSYNA 

       190        200        210        220        230        240 
LIMMAIRQSP EKRLTLNGIY EFIMKNFPYY RENKQGWQNS IRHNLSLNKC FVKVPRHYDD 

       250        260        270        280        290        300 
PGKGNYWMLD PSSDDVFIGG TTGKLRRRST TSRAKLAFKR GARLTSTGLT FMDRAGSLYW 

       310        320        330        340        350        360 
PMSPFLSLHH PRASSTLSYN GTTSAYPSHP MPYSSVLTQN SLGNNHSFST ANGLSVDRLV 

       370        380        390        400        410        420 
NGEIPYATHH LTAAALAASV PCGLSVPCSG TYSLNPCSVN LLAGQTSYFF PHVPHPSMTS 

       430        440        450        460        470        480 
QTSTSMSARA ASSSTSPQAP STLPCESLRP SLPSFTTGLS GGLSDYFTHQ NQGSSSNPLI 


H 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21092.1.
Tissue: Head EMBL BAE21092.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK132305 mRNA. Translation: BAE21092.1.
RefSeqNP_001153584.1. NM_001160112.1.
NP_032267.1. NM_008241.2.
UniGeneMm.4704.

3D structure databases

ProteinModelPortalQ3V1Q8.
SMRQ3V1Q8. Positions 173-261.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ3V1Q8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID15228.
KEGGmmu:15228.

Organism-specific databases

CTD2290.
MGIMGI:1347464. Foxg1.

Phylogenomic databases

HOVERGENHBG051645.
InParanoidQ3V1Q8.
KOK09385.
OMAHPMSYST.
PhylomeDBQ3V1Q8.

Gene expression databases

BgeeQ3V1Q8.
GenevestigatorQ3V1Q8.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSPR00053. FORKHEAD.
SMARTSM00339. FH. 1 hit.
[Graphical view]
PROSITEPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSFOXG1. mouse.
NextBio287819.
SOURCESearch...

Entry information

Entry nameQ3V1Q8_MOUSE
AccessionPrimary (citable) accession number: Q3V1Q8
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 9, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)