Q3V1Q8 (Q3V1Q8_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE21092.1

Gene names

Name:

Foxg1 MGI 1347464

Organism

Mus musculus (Mouse)

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	481 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 fork-head DNA-binding domain. SAAS SAAS018122

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS001766
Cellular component	Nucleus SAAS SAAS001766
Ligand	DNA-binding SAAS SAAS018122
Gene Ontology (GO)
Biological_process	aging Inferred from electronic annotation. Source: Compara axon midline choice point recognition Inferred from mutant phenotype PubMed 15240555. Source: MGI central nervous system neuron development Inferred from mutant phenotype PubMed 16680166. Source: MGI dorsal/ventral pattern formation Inferred from mutant phenotype PubMed 14566948PubMed 15893304. Source: MGI embryo development ending in birth or egg hatching Inferred from Biological aspect of Ancestor. Source: RefGenome forebrain development Inferred from mutant phenotype PubMed 12151532PubMed 14566948PubMed 14704420PubMed 7605629. Source: MGI hindbrain development Inferred from Biological aspect of Ancestor. Source: RefGenome inner ear morphogenesis Inferred from mutant phenotype PubMed 16691564. Source: MGI negative regulation of neuron differentiation Inferred from mutant phenotype PubMed 12151532PubMed 14704420PubMed 7605629. Source: MGI negative regulation of transcription from RNA polymerase II promoter Inferred from Biological aspect of Ancestor. Source: RefGenome nonmotile primary cilium assembly Inferred from Biological aspect of Ancestor. Source: RefGenome nose development Inferred from Biological aspect of Ancestor. Source: RefGenome positive regulation of cell cycle Inferred from mutant phenotype PubMed 15893304. Source: MGI positive regulation of neuroblast proliferation Inferred from mutant phenotype PubMed 15893304. Source: MGI positive regulation of transcription from RNA polymerase II promoter Inferred from Biological aspect of Ancestor. Source: RefGenome regulation of mitotic cell cycle Inferred from mutant phenotype PubMed 12151532. Source: MGI regulation of sequence-specific DNA binding transcription factor activity Inferred from Biological aspect of Ancestor. Source: RefGenome tissue development Inferred from Biological aspect of Ancestor. Source: RefGenome
Cellular_component	transcription factor complex Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular_function	DNA binding, bending Inferred from Biological aspect of Ancestor. Source: RefGenome RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity Inferred from Biological aspect of Ancestor. Source: RefGenome double-stranded DNA binding Inferred from Biological aspect of Ancestor. Source: RefGenome sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor binding Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3V1Q8 [UniParc]. Last modified October 11, 2005. Version 1. Checksum: FF6786C3513AB452	FASTA	481	51,625
	10 20 30 40 50 60 MLDMGDRKEV KMIPKSSFSI NSLVPEAVQN DNHHASHGHH NSHHPQHHHH HHHHHHPPPP 70 80 90 100 110 120 APQPPPPPPQ QQQQQPPPAP QPPQARGAPA ADDDKGPQPL LLPPSTALDG AKADALGAKG 130 140 150 160 170 180 EPGGGPAELA PVGPDEKEKG AGAGGEEKKG AGEGGKDGEG GKEGDKKNGK YEKPPFSYNA 190 200 210 220 230 240 LIMMAIRQSP EKRLTLNGIY EFIMKNFPYY RENKQGWQNS IRHNLSLNKC FVKVPRHYDD 250 260 270 280 290 300 PGKGNYWMLD PSSDDVFIGG TTGKLRRRST TSRAKLAFKR GARLTSTGLT FMDRAGSLYW 310 320 330 340 350 360 PMSPFLSLHH PRASSTLSYN GTTSAYPSHP MPYSSVLTQN SLGNNHSFST ANGLSVDRLV 370 380 390 400 410 420 NGEIPYATHH LTAAALAASV PCGLSVPCSG TYSLNPCSVN LLAGQTSYFF PHVPHPSMTS 430 440 450 460 470 480 QTSTSMSARA ASSSTSPQAP STLPCESLRP SLPSFTTGLS GGLSDYFTHQ NQGSSSNPLI H

References

[1]	"High-efficiency full-length cDNA cloning." Carninci P., Hayashizaki Y. Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[2]	"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes." Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y. Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[3]	"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer." Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y. Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[4]	"Functional annotation of a full-length mouse cDNA collection." The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature 409:685-690(2001) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[5]	"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs." The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team Nature 420:563-573(2002) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[6]	Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y. Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[7]	"The Transcriptional Landscape of the Mammalian Genome." The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science 309:1559-1563(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
[8]	"Antisense Transcription in the Mammalian Transcriptome." RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: C57BL/6J EMBL BAE21092.1. Tissue: Head EMBL BAE21092.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK132305 mRNA. Translation: BAE21092.1.
IPI	IPI00122768.
RefSeq	NP_001153584.1. NM_001160112.1. NP_032267.1. NM_008241.2.
UniGene	Mm.4704.
3D structure databases
ProteinModelPortal	Q3V1Q8.
SMR	Q3V1Q8. Positions 173-261.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3V1Q8.
Proteomic databases
PRIDE	Q3V1Q8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	15228.
KEGG	mmu:15228.
UCSC	uc007nmf.2. mouse.
Organism-specific databases
CTD	2290.
MGI	MGI:1347464. Foxg1.
Phylogenomic databases
HOVERGEN	HBG051645.
InParanoid	Q3V1Q8.
KO	K09385.
OMA	YSTMLTQ.
Gene expression databases
ArrayExpress	Q3V1Q8.
Bgee	Q3V1Q8.
Genevestigator	Q3V1Q8.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR001766. TF_fork_head. IPR018122. TF_fork_head_CS. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00250. Fork_head. 1 hit. [Graphical view]
PRINTS	PR00053. FORKHEAD.
SMART	SM00339. FH. 1 hit. [Graphical view]
PROSITE	PS00657. FORK_HEAD_1. 1 hit. PS00658. FORK_HEAD_2. 1 hit. PS50039. FORK_HEAD_3. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	FOXG1. mouse.
NextBio	287819.
SOURCE	Search...

Entry information

Entry name

Q3V1Q8_MOUSE

Accession

Primary (citable) accession number: Q3V1Q8

Entry history

Integrated into UniProtKB/TrEMBL:	October 11, 2005
Last sequence update:	October 11, 2005
Last modified:	May 1, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)