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Q3V113

- Q3V113_MOUSE

UniProt

Q3V113 - Q3V113_MOUSE

Protein
Submitted name:

Protein Pygo2

Gene

Pygo2

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. chromatin binding Source: MGI
    2. histone acetyltransferase regulator activity Source: MGI
    3. histone binding Source: MGI
    4. protein binding Source: MGI
    5. zinc ion binding Source: InterPro

    GO - Biological processi

    1. brain development Source: MGI
    2. canonical Wnt signaling pathway Source: MGI
    3. developmental growth Source: MGI
    4. in utero embryonic development Source: MGI
    5. kidney development Source: MGI
    6. lens development in camera-type eye Source: MGI
    7. mammary gland development Source: MGI
    8. palate development Source: MGI
    9. positive regulation of chromatin binding Source: MGI
    10. post-embryonic development Source: MGI
    11. regulation of histone acetylation Source: GOC
    12. regulation of histone H3-K4 methylation Source: MGI
    13. regulation of mammary gland epithelial cell proliferation Source: MGI
    14. spermatid development Source: MGI
    15. spermatid nucleus differentiation Source: MGI
    16. Wnt signaling pathway Source: MGI

    Keywords - Ligandi

    Metal-binding, Zinc

    Enzyme and pathway databases

    ReactomeiREACT_216539. formation of the beta-catenin:TCF transactivating complex.
    REACT_219771. deactivation of the beta-catenin transactivating complex.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Pygo2Imported
    Gene namesi
    Name:Pygo2Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 3

    Organism-specific databases

    MGIiMGI:1916161. Pygo2.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriQ3V113.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000053672.

    Family & Domainsi

    Keywords - Domaini

    Zinc-fingerSAAS annotation

    Phylogenomic databases

    eggNOGiNOG72798.
    GeneTreeiENSGT00530000063948.
    HOGENOMiHOG000001580.
    HOVERGENiHBG053774.
    InParanoidiQ3V113.
    TreeFamiTF333020.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    InterProiIPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view]
    PfamiPF00628. PHD. 1 hit.
    [Graphical view]
    SMARTiSM00249. PHD. 1 hit.
    [Graphical view]
    SUPFAMiSSF57903. SSF57903. 1 hit.
    PROSITEiPS01359. ZF_PHD_1. 1 hit.
    PS50016. ZF_PHD_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3V113-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSPEKKRRK SNTQGPAYSH LTEFAPPPTP MVDHLVASNP FEDDFGAPKV    50
    GGAGPPFLGS PVPFGGFRVQ GGMAGQVPPG YGTGGGGGPQ PLRRQPPPFP 100
    PNPMGPAFNM PPQGPGYPPP GNMNFPSQPF NQSLGQNFSP PGGQVMPGPV 150
    GGFGPMISPT MGQPPRGELG PPPLPQRFTQ PGAPFGPSLQ RPGQGLPSLP 200
    PNTSPFPGPD PGFPGPGGED GGKPLNPPAP TAFPQEPHSG SPAAAVNGNQ 250
    PSFPPSSSGR GGGTPDANSL APPGKAGGGS GPQPPPGLVY PCGACRSEVN 300
    DDQDAILCEA SCQKWFHREC TGMTESAYGL LTTEASAVWA CDLCLKTKEI 350
    QSVYIREGMG QLVAANDG 368
    Length:368
    Mass (Da):37,537
    Last modified:October 11, 2005 - v1
    Checksum:iC9DB6C27B12979E8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC171273 Genomic DNA. No translation available.
    AK132759 mRNA. Translation: BAE21340.1.
    RefSeqiNP_081145.1. NM_026869.2.
    XP_006502067.1. XM_006502004.1.
    XP_006502068.1. XM_006502005.1.
    XP_006502069.1. XM_006502006.1.
    UniGeneiMm.22521.

    Genome annotation databases

    EnsembliENSMUST00000107413; ENSMUSP00000103036; ENSMUSG00000047824.
    GeneIDi68911.
    KEGGimmu:68911.
    UCSCiuc008pzp.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC171273 Genomic DNA. No translation available.
    AK132759 mRNA. Translation: BAE21340.1 .
    RefSeqi NP_081145.1. NM_026869.2.
    XP_006502067.1. XM_006502004.1.
    XP_006502068.1. XM_006502005.1.
    XP_006502069.1. XM_006502006.1.
    UniGenei Mm.22521.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000053672.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000107413 ; ENSMUSP00000103036 ; ENSMUSG00000047824 .
    GeneIDi 68911.
    KEGGi mmu:68911.
    UCSCi uc008pzp.1. mouse.

    Organism-specific databases

    CTDi 90780.
    MGIi MGI:1916161. Pygo2.

    Phylogenomic databases

    eggNOGi NOG72798.
    GeneTreei ENSGT00530000063948.
    HOGENOMi HOG000001580.
    HOVERGENi HBG053774.
    InParanoidi Q3V113.
    TreeFami TF333020.

    Enzyme and pathway databases

    Reactomei REACT_216539. formation of the beta-catenin:TCF transactivating complex.
    REACT_219771. deactivation of the beta-catenin transactivating complex.

    Miscellaneous databases

    ChiTaRSi PYGO2. mouse.
    NextBioi 328163.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3V113.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    InterProi IPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view ]
    Pfami PF00628. PHD. 1 hit.
    [Graphical view ]
    SMARTi SM00249. PHD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57903. SSF57903. 1 hit.
    PROSITEi PS01359. ZF_PHD_1. 1 hit.
    PS50016. ZF_PHD_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: TestisImported.
    9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    10. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiQ3V113_MOUSE
    AccessioniPrimary (citable) accession number: Q3V113
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3