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Q3V0U2 (Q3V0U2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAE21411.1
Gene names
Name:Grm1 MGI 1351338
OrganismMus musculus (Mouse) EMBL BAE21411.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length742 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity SAAS SAAS011500.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE21411.1

Sequences

Sequence LengthMass (Da)Tools
Q3V0U2 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: CC66B666CF2E8A59

FASTA74281,802
        10         20         30         40         50         60 
SFVGVSGEEV WFDEKGDAPG RYDIMNLQYT EANRYDYVHV GTWHEGVLNI DDYKIQMNKS 

        70         80         90        100        110        120 
GMVRSVCSEP CLKGQIKVIR KGEVSCCWIC TACKENEFVQ DEFTCRACDL GWWPNAELTG 

       130        140        150        160        170        180 
CEPITIRYLE WSDIESIIAI AFSCLGILVT LFVTLIFVLY RDTPVVKSSS RELCYIILAG 

       190        200        210        220        230        240 
IFLGYVCPFT LIAKPTTTSC YLQRLLVGLS SAMCYSALVT KTNRIARILA GSKKKICTRK 

       250        260        270        280        290        300 
PRFMSAWAQV IIASILISVQ LTLVVTLIIM EPPMPILSYP SIKEVYLICN TSNLGVVAPV 

       310        320        330        340        350        360 
GYNGLLIMSC TYYAFKTRNV PANFNEAKYI AFTMYTTCII WLAFVPIYFG SNYKIITTCF 

       370        380        390        400        410        420 
AVSLSVTVAL GCMFTPKMYI IIAKPERNVR SAFTTSDVVR MHVGDGKLPC RSNTFLNIFR 

       430        440        450        460        470        480 
RKKPGAGNAN SNGKSVSWSE PGGRQAPKGQ HVWQRLSVHV KTNETACNQT AVIKPLTKSY 

       490        500        510        520        530        540 
QGSGKSLTFS DASTKTLYNV EEEDNTPSTH FSPPSSPSMV VHRRGPPVAT TPPLPPHLSA 

       550        560        570        580        590        600 
EETPLFLADS VIPKGLPPPL PQQQQQPPPQ PPPQQPKSLM DQLQGVVTNF GSGIPDFHAV 

       610        620        630        640        650        660 
LAGPGTPGNG LRSLYPPPPP PQHLQMLPLQ LSTFREEPIS PPGEDDDDDS SERFKLLQEF 

       670        680        690        700        710        720 
VYEREGNTEE DDLEEEEDLP AASKLTPEDS PALTPPSPFR DSVASGSSVP SSPVSESVLC 

       730        740 
TPPNVTYASV ILRDYKQSSS TL

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE21411.1.
Tissue: Testis EMBL BAE21411.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK132901 mRNA. Translation: BAE21411.1.
IPIIPI00110402.
RefSeqNP_058672.1. NM_016976.3.
UniGeneMm.391904.
Mm.482986.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ3V0U2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID14816.
KEGGmmu:14816.

Organism-specific databases

CTD2911.
MGIMGI:1351338. Grm1.

Phylogenomic databases

HOVERGENHBG107965.
InParanoidQ3V0U2.
KOK04604.

Gene expression databases

ArrayExpressQ3V0U2.
BgeeQ3V0U2.
GenevestigatorQ3V0U2.

Family and domain databases

InterProIPR000337. GPCR_3.
IPR011500. GPCR_3_9-Cys_dom.
IPR017978. GPCR_3_C.
IPR017979. GPCR_3_CS.
IPR000162. GPCR_3_mtglu_rcpt.
IPR001256. GPCR_3_mtglu_rcpt_1.
IPR019588. Metabotropic_Glu_rcpt_Homer-bd.
[Graphical view]
PfamPF00003. 7tm_3. 1 hit.
PF10606. GluR_Homer-bdg. 1 hit.
PF07562. NCD3G. 1 hit.
[Graphical view]
PRINTSPR00248. GPCRMGR.
PR01051. MTABOTROPC1R.
PR00593. MTABOTROPICR.
PROSITEPS00980. G_PROTEIN_RECEP_F3_2. 1 hit.
PS00981. G_PROTEIN_RECEP_F3_3. 1 hit.
PS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio287019.
SOURCESearch...

Entry information

Entry nameQ3V0U2_MOUSE
AccessionPrimary (citable) accession number: Q3V0U2
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 3, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info