Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

LIM domain only 1, isoform CRA_c

Gene

Lmo1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LIM domain only 1, isoform CRA_cImported
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Lmo1Imported
ORF Names:mCG_2321Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:102812. Lmo1.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSMUSG00000036111.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037079.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 84LIM zinc-bindingInterPro annotationAdd BLAST63
Domaini86 – 148LIM zinc-bindingInterPro annotationAdd BLAST63

Keywords - Domaini

LIM domainSAAS annotation

Phylogenomic databases

eggNOGiKOG0490. Eukaryota.
ENOG410YIJ3. LUCA.
HOVERGENiHBG054231.
OMAiCPRTGRP.
OrthoDBiEOG091G0LKW.

Family and domain databases

InterProiView protein in InterPro
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 2 hits.
SMARTiView protein in SMART
SM00132. LIM. 2 hits.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q3UZX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMVLDKEDGV PMLSVQPKGK QKGCAGCNRK IKDRYLLKAL DKYWHEDCLK
60 70 80 90 100
CACCDCRLGE VGSTLYTKAN LILCRRDYLR LFGTTGNCAA CSKLIPAFEM
110 120 130 140 150
VMRARDNVYH LDCFACQLCN QRFCVGDKFF LKNNMILCQV DYEEGHLNGT

FESQVQ
Length:156
Mass (Da):17,805
Last modified:October 11, 2005 - v1
Checksum:i7AAEB122870CCAAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK133586 mRNA. Translation: BAE21734.1.
CH466531 Genomic DNA. Translation: EDL16929.1.
RefSeqiNP_476514.1. NM_057173.3.
XP_006507258.1. XM_006507195.3.
UniGeneiMm.360145.

Genome annotation databases

GeneIDi109594.
KEGGimmu:109594.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK133586 mRNA. Translation: BAE21734.1.
CH466531 Genomic DNA. Translation: EDL16929.1.
RefSeqiNP_476514.1. NM_057173.3.
XP_006507258.1. XM_006507195.3.
UniGeneiMm.360145.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037079.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi109594.
KEGGimmu:109594.

Organism-specific databases

CTDi4004.
MGIiMGI:102812. Lmo1.

Phylogenomic databases

eggNOGiKOG0490. Eukaryota.
ENOG410YIJ3. LUCA.
HOVERGENiHBG054231.
OMAiCPRTGRP.
OrthoDBiEOG091G0LKW.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000036111.

Family and domain databases

InterProiView protein in InterPro
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 2 hits.
SMARTiView protein in SMART
SM00132. LIM. 2 hits.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ3UZX1_MOUSE
AccessioniPrimary (citable) accession number: Q3UZX1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 10, 2017
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.