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Protein
Submitted name:

Putative uncharacterized protein

Gene

Fn1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Fn1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:95566. Fn1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ3UZF9.

Expressioni

Gene expression databases

BgeeiQ3UZF9.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000054499.

Structurei

3D structure databases

ProteinModelPortaliQ3UZF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 11790Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini118 – 21194Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini212 – 30392Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini304 – 39188Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini392 – 48594Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini486 – 57287Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini573 – 66391Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini771 – 86595Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini872 – 91645Fibronectin type-IInterPro annotationAdd
BLAST
Domaini917 – 95943Fibronectin type-IInterPro annotationAdd
BLAST
Domaini961 – 100141Fibronectin type-IInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IF4N. Eukaryota.
ENOG410Y2NH. LUCA.
HOVERGENiHBG103380.
KOiK05717.

Family and domain databases

Gene3Di2.60.40.10. 8 hits.
InterProiIPR000083. Fibronectin_type1.
IPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00039. fn1. 3 hits.
PF00041. fn3. 8 hits.
[Graphical view]
SMARTiSM00058. FN1. 3 hits.
SM00060. FN3. 8 hits.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 5 hits.
PROSITEiPS01253. FN1_1. 3 hits.
PS51091. FN1_2. 3 hits.
PS50853. FN3. 8 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3UZF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EYLVSVSSVY EQHESIPLRG RQKTGLDSPT GFDSSDITAN SFTVHWVAPR
60 70 80 90 100
APITGYIIRH HAEHSVGRPR QDRVPPSRNS ITLTNLNPGT EYVVSIIAVN
110 120 130 140 150
GREESPPLIG QQATVSDIPR DLEVIASTPT SLLISWEPPA VSVRYYRITY
160 170 180 190 200
GETGGNSPVQ EFTVPGSKST ATINNIKPGA DYTITLYAVT GRGDSPASSK
210 220 230 240 250
PVSINYKTEI DKPSQMQVTD VQDNSISVRW LPSTSPVTGY RVTTTPKNGL
260 270 280 290 300
GPSKTKTASP DQTEMTIEGL QPTVEYVVSV YAQNRNGESQ PLVQTAVTNI
310 320 330 340 350
DRPKGLAFTD VDVDSIKIAW ESPQGQVSRY RVTYSSPEDG IRELFPAPDG
360 370 380 390 400
EDDTAELQGL RPGSEYTVSV VALHDDMESQ PLIGIQSTAI PAPTNLKFSQ
410 420 430 440 450
VTPTSFTAQW IAPSVQLTGY RVRVNPKEKT GPMKEINLSP DSSSVIVSGL
460 470 480 490 500
MVATKYEVSV YALKDTLTSR PAQGVITTLE NVSPPRRARV TDATETTITI
510 520 530 540 550
SWRTKTETIT GFQVDAIPAN GQTPVQRSIS PDVRSYTITG LQPGTDYKIH
560 570 580 590 600
LYTLNDNARS SPVIIDASTA IDAPSNLRFL TTTPNSLLVS WQAPRARITG
610 620 630 640 650
YIIKYEKPGS PPREVVPRPR PGVTEATITG LEPGTEYTIY VIALKNNQKS
660 670 680 690 700
EPLIGRKKTD ELPQLVTLPH PNLHGPEILD VPSTVQKTPF ITNPGYDTEN
710 720 730 740 750
GIQLPGTTHQ QPSVGQQMIF EEHGFRRTTP PTAATPVRLR PRPYLPNVDE
760 770 780 790 800
EVQIGHVPRG DVDYHLYPHV PGLNPNASTG QEALSQTTIS WTPFQESSEY
810 820 830 840 850
IISCQPVGTD EEPLQFQVPG TSTSATLTGL TRGVTYNIIV EALQNQRRHK
860 870 880 890 900
VREEVVTVGN AVSEGLNQPT DDSCFDPYTV SHYAIGEEWE RLSDAGFKLT
910 920 930 940 950
CQCLGFGSGH FRCDSSKWCH DNGVNYKIGE KWDRQGENGQ RMSCTCLGNG
960 970 980 990 1000
KGEFKCDPHE ATCYDDGKTY HVGEQWQKEY LGAICSCTCF GGQRGWRCDN
1010 1020 1030 1040 1050
CRRPGAAEPS PDGTTGHTYN QYTQRYNQRT NTNVNCPIEC FMPLDVQADR

DDSRE
Length:1,055
Mass (Da):115,893
Last modified:October 11, 2005 - v1
Checksum:iA92CF245686F382E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK133868 mRNA. Translation: BAE21898.1.
RefSeqiNP_034363.1. NM_010233.2.
UniGeneiMm.193099.

Genome annotation databases

GeneIDi14268.
KEGGimmu:14268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK133868 mRNA. Translation: BAE21898.1.
RefSeqiNP_034363.1. NM_010233.2.
UniGeneiMm.193099.

3D structure databases

ProteinModelPortaliQ3UZF9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000054499.

Proteomic databases

PaxDbiQ3UZF9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi14268.
KEGGimmu:14268.

Organism-specific databases

CTDi2335.
MGIiMGI:95566. Fn1.

Phylogenomic databases

eggNOGiENOG410IF4N. Eukaryota.
ENOG410Y2NH. LUCA.
HOVERGENiHBG103380.
KOiK05717.

Miscellaneous databases

ChiTaRSiFn1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ3UZF9.

Family and domain databases

Gene3Di2.60.40.10. 8 hits.
InterProiIPR000083. Fibronectin_type1.
IPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00039. fn1. 3 hits.
PF00041. fn3. 8 hits.
[Graphical view]
SMARTiSM00058. FN1. 3 hits.
SM00060. FN3. 8 hits.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 5 hits.
PROSITEiPS01253. FN1_1. 3 hits.
PS51091. FN1_2. 3 hits.
PS50853. FN3. 8 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: Whole bodyImported.

Entry informationi

Entry nameiQ3UZF9_MOUSE
AccessioniPrimary (citable) accession number: Q3UZF9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 11, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.