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Q3UZ81

- Q3UZ81_MOUSE

UniProt

Q3UZ81 - Q3UZ81_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Il16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cytokine activity Source: MGI
    2. protein binding Source: MGI

    GO - Biological processi

    1. induction of positive chemotaxis Source: MGI
    2. leukocyte chemotaxis Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Il16Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1270855. Il16.

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: MGI

    Expressioni

    Gene expression databases

    GenevestigatoriQ3UZ81.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3UZ81.
    SMRiQ3UZ81. Positions 398-624.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 2 PDZ (DHR) domains.UniRule annotation

    Phylogenomic databases

    HOVERGENiHBG000100.
    InParanoidiQ3UZ81.

    Family and domain databases

    Gene3Di2.30.42.10. 2 hits.
    InterProiIPR020450. IL-16.
    IPR001478. PDZ.
    [Graphical view]
    PfamiPF00595. PDZ. 2 hits.
    [Graphical view]
    PRINTSiPR01931. INTRLEUKIN16.
    SMARTiSM00228. PDZ. 2 hits.
    [Graphical view]
    SUPFAMiSSF50156. SSF50156. 2 hits.
    PROSITEiPS50106. PDZ. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3UZ81-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDYSFDITAE DPWVRISDCI KNLFSPIMSE NHSHTPLQPN TSLGEEDGTQ    50
    GCPEGGLSKM DAANGAPRVY KSADGSTVKK GPPVAPKPAW FRQSLKGLRN 100
    RAPDPRRPPE VASAIQPTPV SRDPPGPQPQ ASSSIRQRIS SFENFGSSQL 150
    PDRGVQRLSL QPSSGETTKF PGKQDGGRFS GLLGQGATVT AKHRQTEVES 200
    MSTTFPNSSE VRDPGLPESP PPGQRPSTKA LSPDPLLRLL TTQSEDTQGP 250
    GLKMPSQRAR SFPLTRTQSC ETKLLDEKAS KLYSISSQLS SAVMKSLLCL 300
    PSSVSCGQIT CIPKERVSPK SPCNNSSAAE GFGEAMASDT GFSLNLSELR 350
    EYSEGLTEPG ETEDRNHCSS QAGQSVISLL SAEELEKLIE EVRVLDEATL 400
    KQLDSIHVTI LHKEEGAGLG FSLAGGADLE NKVITVHRVF TNGLASQGGT 450
    IQKGNEVLSI NGKSLKGATH NDALAILRQA RDPRQAVIVT RRTTVEATHD 500
    LNSSTDSTAS ASAASDISVE SKEATVCTVT LEKTSAGLGF SLEGGKGSLH 550
    GDKPLTINRI FKGTEQGEMV QPGDEILQLA GTAVQGLTRF EAWNVIKALP 600
    DGPVTIVIRR TSLQCKQTTA SADS 624
    Length:624
    Mass (Da):66,433
    Last modified:October 11, 2005 - v1
    Checksum:i01EC116F349B816E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK134007 mRNA. Translation: BAE21977.1.
    UniGeneiMm.10137.

    Genome annotation databases

    UCSCiuc009idt.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK134007 mRNA. Translation: BAE21977.1 .
    UniGenei Mm.10137.

    3D structure databases

    ProteinModelPortali Q3UZ81.
    SMRi Q3UZ81. Positions 398-624.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi uc009idt.1. mouse.

    Organism-specific databases

    MGIi MGI:1270855. Il16.

    Phylogenomic databases

    HOVERGENi HBG000100.
    InParanoidi Q3UZ81.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3UZ81.

    Family and domain databases

    Gene3Di 2.30.42.10. 2 hits.
    InterProi IPR020450. IL-16.
    IPR001478. PDZ.
    [Graphical view ]
    Pfami PF00595. PDZ. 2 hits.
    [Graphical view ]
    PRINTSi PR01931. INTRLEUKIN16.
    SMARTi SM00228. PDZ. 2 hits.
    [Graphical view ]
    SUPFAMi SSF50156. SSF50156. 2 hits.
    PROSITEi PS50106. PDZ. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: ThymusImported.

    Entry informationi

    Entry nameiQ3UZ81_MOUSE
    AccessioniPrimary (citable) accession number: Q3UZ81
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)