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Q3UZ81

- Q3UZ81_MOUSE

UniProt

Q3UZ81 - Q3UZ81_MOUSE

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Protein
Submitted name:

Putative uncharacterized protein

Gene

Il16

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. cytokine activity Source: MGI

GO - Biological processi

  1. induction of positive chemotaxis Source: MGI
  2. leukocyte chemotaxis Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Il16Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1270855. Il16.

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ3UZ81.

Structurei

3D structure databases

ProteinModelPortaliQ3UZ81.
SMRiQ3UZ81. Positions 398-624.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 PDZ (DHR) domains.UniRule annotation

Phylogenomic databases

HOVERGENiHBG000100.

Family and domain databases

Gene3Di2.30.42.10. 2 hits.
InterProiIPR020450. IL-16.
IPR001478. PDZ.
[Graphical view]
PfamiPF00595. PDZ. 2 hits.
[Graphical view]
PRINTSiPR01931. INTRLEUKIN16.
SMARTiSM00228. PDZ. 2 hits.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 2 hits.
PROSITEiPS50106. PDZ. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UZ81-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDYSFDITAE DPWVRISDCI KNLFSPIMSE NHSHTPLQPN TSLGEEDGTQ
60 70 80 90 100
GCPEGGLSKM DAANGAPRVY KSADGSTVKK GPPVAPKPAW FRQSLKGLRN
110 120 130 140 150
RAPDPRRPPE VASAIQPTPV SRDPPGPQPQ ASSSIRQRIS SFENFGSSQL
160 170 180 190 200
PDRGVQRLSL QPSSGETTKF PGKQDGGRFS GLLGQGATVT AKHRQTEVES
210 220 230 240 250
MSTTFPNSSE VRDPGLPESP PPGQRPSTKA LSPDPLLRLL TTQSEDTQGP
260 270 280 290 300
GLKMPSQRAR SFPLTRTQSC ETKLLDEKAS KLYSISSQLS SAVMKSLLCL
310 320 330 340 350
PSSVSCGQIT CIPKERVSPK SPCNNSSAAE GFGEAMASDT GFSLNLSELR
360 370 380 390 400
EYSEGLTEPG ETEDRNHCSS QAGQSVISLL SAEELEKLIE EVRVLDEATL
410 420 430 440 450
KQLDSIHVTI LHKEEGAGLG FSLAGGADLE NKVITVHRVF TNGLASQGGT
460 470 480 490 500
IQKGNEVLSI NGKSLKGATH NDALAILRQA RDPRQAVIVT RRTTVEATHD
510 520 530 540 550
LNSSTDSTAS ASAASDISVE SKEATVCTVT LEKTSAGLGF SLEGGKGSLH
560 570 580 590 600
GDKPLTINRI FKGTEQGEMV QPGDEILQLA GTAVQGLTRF EAWNVIKALP
610 620
DGPVTIVIRR TSLQCKQTTA SADS
Length:624
Mass (Da):66,433
Last modified:October 11, 2005 - v1
Checksum:i01EC116F349B816E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK134007 mRNA. Translation: BAE21977.1.
UniGeneiMm.10137.

Genome annotation databases

UCSCiuc009idt.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK134007 mRNA. Translation: BAE21977.1 .
UniGenei Mm.10137.

3D structure databases

ProteinModelPortali Q3UZ81.
SMRi Q3UZ81. Positions 398-624.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi uc009idt.1. mouse.

Organism-specific databases

MGIi MGI:1270855. Il16.

Phylogenomic databases

HOVERGENi HBG000100.

Miscellaneous databases

SOURCEi Search...

Gene expression databases

Genevestigatori Q3UZ81.

Family and domain databases

Gene3Di 2.30.42.10. 2 hits.
InterProi IPR020450. IL-16.
IPR001478. PDZ.
[Graphical view ]
Pfami PF00595. PDZ. 2 hits.
[Graphical view ]
PRINTSi PR01931. INTRLEUKIN16.
SMARTi SM00228. PDZ. 2 hits.
[Graphical view ]
SUPFAMi SSF50156. SSF50156. 2 hits.
PROSITEi PS50106. PDZ. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: ThymusImported.

Entry informationi

Entry nameiQ3UZ81_MOUSE
AccessioniPrimary (citable) accession number: Q3UZ81
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)