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Q3UYP1 (Q3UYP1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Ankrd12 MGI 1914357
OrganismMus musculus (Mouse) EMBL BAE22171.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length705 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 2 ANK repeats. RuleBase RU003321

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE22171.1
Non-terminal residue7051 EMBL BAE22171.1

Sequences

Sequence LengthMass (Da)Tools
Q3UYP1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 8956DADF60CCFD69

FASTA70581,978
        10         20         30         40         50         60 
LISLGANVNV KDFAGWTPLH EACNVGYYDV AKILIAAGAD VNTQGLDDDT PLHDSASSGH 

        70         80         90        100        110        120 
RDIVKLLLRH GGNPFQANKH GERPVDVAET EELELLLKRE VPLSGDDESY TDSEEAQSVN 

       130        140        150        160        170        180 
PSSVDENIDS ETEKDSFVCG SKILPSKAPL PSALDEYEFK DDDEEEISKM IDDRHILRKE 

       190        200        210        220        230        240 
QRRENESEAE RSGLFAKQEK TFYSKSFKTK KQKPSRVLCS STESSDEEGL QNRKISTACS 

       250        260        270        280        290        300 
VAESSHPDMQ AKKEYEYKQK GKVKRKLKNQ NKNKENQELK QEKEGKENSR IATLTVNTAL 

       310        320        330        340        350        360 
DCSEKYREEG NFRKSFSPKD DTSLHLFHIS TGKSPKHSCG LSEKQTPLKQ EHTKACISPG 

       370        380        390        400        410        420 
SSEMSLQPDL TRYDNAEPES SNVKSYKHKE KNKQQKDFHI EFGEKSNAKI KDEDHNPAFE 

       430        440        450        460        470        480 
NSDCTLKKMD KEGKTLKKHK LKHKEKDKEK HKKEVEGEKE KYKNKDNAKE LQRSIEFDRE 

       490        500        510        520        530        540 
FWKENFFKSD ETEDLFLTME HESIIEKKTK MEKNMKDDRS AKEKHVSKER NFKEEREKTK 

       550        560        570        580        590        600 
KENEKSLREE KVKDPKEEKD SVSTEKEAEC CSVGVSVSQE AAGLHSSEKE MDAEKQERHT 

       610        620        630        640        650        660 
KEREKSDRRF QTKEKELDRN ERKFSEKEKK IKHEHKSERE KLDFSDCTDR VREKDKLYSH 

       670        680        690        700 
QTERCHKDSE KLKNTVRKTD DRERNREKAD RKHDREKPER ERYLA 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22171.1.
Tissue: Medulla oblongata EMBL BAE22171.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK134530 mRNA. Translation: BAE22171.1.
UniGeneMm.34706.
Mm.441953.

3D structure databases

ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteQ3UYP1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1914357. Ankrd12.

Phylogenomic databases

HOVERGENHBG084293.
InParanoidQ3UYP1.

Gene expression databases

ArrayExpressQ3UYP1.
BgeeQ3UYP1.
GenevestigatorQ3UYP1.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
SMARTSM00248. ANK. 2 hits.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSANKRD12. mouse.
SOURCESearch...

Entry information

Entry nameQ3UYP1_MOUSE
AccessionPrimary (citable) accession number: Q3UYP1
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: March 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)