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Q3UYN0 (Q3UYN0_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Grik5 MGI 95818
OrganismMus musculus (Mouse) EMBL BAE22182.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length123 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processcellular response to glucose stimulus

Inferred from electronic annotation. Source: Ensembl

establishment of localization in cell

Inferred from electronic annotation. Source: Ensembl

ion transmembrane transport

Inferred from Biological aspect of Ancestor. Source: GOC

ionotropic glutamate receptor signaling pathway

Inferred from genetic interaction PubMed 1310861. Source: GOC

positive regulation of neuron apoptotic process

Inferred from electronic annotation. Source: Ensembl

protein retention in ER lumen

Inferred from electronic annotation. Source: Ensembl

receptor clustering

Inferred from electronic annotation. Source: Ensembl

regulation of excitatory postsynaptic membrane potential

Inferred from mutant phenotype PubMed 12533602. Source: MGI

regulation of membrane potential

Inferred from genetic interaction PubMed 1310861. Source: MGI

regulation of synaptic vesicle fusion to presynaptic membrane

Inferred from mutant phenotype PubMed 12533602. Source: MGI

synaptic transmission, glutamatergic

Inferred from mutant phenotype PubMed 12533602. Source: MGI

   Cellular_componentdendrite

Inferred from Biological aspect of Ancestor. Source: RefGenome

endoplasmic reticulum

Inferred from direct assay PubMed 16814779. Source: MGI

kainate selective glutamate receptor complex

Inferred from physical interaction PubMed 12954862PubMed 17174564. Source: MGI

membrane

Inferred from direct assay PubMed 12954862. Source: MGI

perikaryon

Inferred from electronic annotation. Source: Ensembl

postsynaptic density

Inferred from electronic annotation. Source: Ensembl

postsynaptic membrane

Inferred from direct assay PubMed 12954862. Source: MGI

presynaptic membrane

Inferred from direct assay PubMed 12954862. Source: MGI

terminal bouton

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionextracellular-glutamate-gated ion channel activity

Inferred from Biological aspect of Ancestor. Source: RefGenome

kainate selective glutamate receptor activity

Inferred from genetic interaction PubMed 1310861. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE22182.1

Sequences

Sequence LengthMass (Da)Tools
Q3UYN0 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: FD745D91F7AB49F6

FASTA12312,903
        10         20         30         40         50         60 
KTSRSRRRRR PGGPSRALLS LRAVREMRLS NGKLYSAGAG GDAGAHGGPQ RLLDDPGPPG 

        70         80         90        100        110        120 
GPRPQAPTPC THVRVCQECR RIQALRASGA GAPPRGLGTP AEATSPPRPR PGPTGPRELT 


EHE 

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22182.1.
Tissue: Medulla oblongata EMBL BAE22182.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK134550 mRNA. Translation: BAE22182.1.
UniGeneMm.2879.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Chemistry

BindingDBQ3UYN0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:95818. Grik5.

Phylogenomic databases

InParanoidQ3UYN0.

Gene expression databases

ArrayExpressQ3UYN0.
BgeeQ3UYN0.
GenevestigatorQ3UYN0.

Family and domain databases

ProtoNetSearch...

Other

ChiTaRSGRIK5. mouse.
SOURCESearch...

Entry information

Entry nameQ3UYN0_MOUSE
AccessionPrimary (citable) accession number: Q3UYN0
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)