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Protein
Submitted name:

RIKEN cDNA 6330412F12, isoform CRA_e

Gene

Nub1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
RIKEN cDNA 6330412F12, isoform CRA_eImported
Gene namesi
Name:Nub1Imported
Synonyms:6330412F12RikImported
ORF Names:mCG_16508Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1889001. Nub1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000028954.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000070265.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini373 – 413UBAInterPro annotationAdd BLAST41
Domaini423 – 469UBAInterPro annotationAdd BLAST47
Domaini488 – 528UBAInterPro annotationAdd BLAST41

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili42 – 69Sequence analysisAdd BLAST28
Coiled coili156 – 193Sequence analysisAdd BLAST38
Coiled coili410 – 435Sequence analysisAdd BLAST26

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2561. Eukaryota.
ENOG410ZK3P. LUCA.
HOVERGENiHBG045600.

Family and domain databases

InterProiIPR011990. TPR-like_helical_dom.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PfamiPF00627. UBA. 3 hits.
[Graphical view]
SMARTiSM00165. UBA. 3 hits.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 3 hits.
SSF48452. SSF48452. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50030. UBA. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UYM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQKKYLQAK LTQFLREDRI QLWKPPYTKE NKEVGLAVKD LAKKYSERLE
60 70 80 90 100
CCENEVENII EEIRRKAIER GTGNEHYRTT GIATIEVFLP PRLRKHDKKS
110 120 130 140 150
LLETRLHVTG RDLRCQIAET FGFQENYIKI VINKKQLQLG KSLEEQGVTH
160 170 180 190 200
NVKAMVLELK QSEEDVRKNL QLEEEEQNEA ELKERRIQRT KRGLEILAER
210 220 230 240 250
AEMVVDPETM PYLDIANQTG RSLRIPPAER KALMLAMGYH EKGRAFLKRK
260 270 280 290 300
EYGIALPCLL DADRYFCECK ELLDTVDNYA VLQLDIVWCY FRLEQLECLD
310 320 330 340 350
DAEKKLNLAQ KCFKNCYGEN HQRLVHIKGN CGKEKVLFLR LYLLQGIQNY
360 370 380 390 400
HSGNGEEARE YLNKARQLFK ELYIDPSKVH NLLQLGFTAQ EARLGLRACD
410 420 430 440 450
GNVDHAATHI SNRREELAQI RKEEKEKRRR RLENVNTLRG MGYSTQAAKQ
460 470 480 490 500
ALHQARGNLD DALKVLLSNP HMWWLQDADP ENNSRQASPS QESINQLVYM
510 520 530 540 550
GFDTVVAEAA LRVFGGNVQL AAQTLAHHGG SLPPDLQFSG EDSSPTPSTS
560 570 580 590 600
PSDSAGTSSA STDEDMETEA VNEILEDIPE HEEDYLDSTL EDEEVIIAEY
610
LSYVESISSA AKNN
Length:614
Mass (Da):70,307
Last modified:October 11, 2005 - v1
Checksum:i8287222F141D1B80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK134581 mRNA. Translation: BAE22191.1.
CH466586 Genomic DNA. Translation: EDL03099.1.
RefSeqiNP_058016.2. NM_016736.3.
UniGeneiMm.407975.
Mm.5856.

Genome annotation databases

GeneIDi53312.
KEGGimmu:53312.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK134581 mRNA. Translation: BAE22191.1.
CH466586 Genomic DNA. Translation: EDL03099.1.
RefSeqiNP_058016.2. NM_016736.3.
UniGeneiMm.407975.
Mm.5856.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000070265.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi53312.
KEGGimmu:53312.

Organism-specific databases

CTDi51667.
MGIiMGI:1889001. Nub1.

Phylogenomic databases

eggNOGiKOG2561. Eukaryota.
ENOG410ZK3P. LUCA.
HOVERGENiHBG045600.

Miscellaneous databases

ChiTaRSiNub1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000028954.

Family and domain databases

InterProiIPR011990. TPR-like_helical_dom.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PfamiPF00627. UBA. 3 hits.
[Graphical view]
SMARTiSM00165. UBA. 3 hits.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 3 hits.
SSF48452. SSF48452. 1 hit.
SSF54236. SSF54236. 1 hit.
PROSITEiPS50030. UBA. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3UYM1_MOUSE
AccessioniPrimary (citable) accession number: Q3UYM1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 2, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.