Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q3UYK1 (Q3UYK1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAE22211.1
Gene names
Name:Kl MGI 1101771
OrganismMus musculus (Mouse) EMBL BAE22211.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length401 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE22211.1

Sequences

Sequence LengthMass (Da)Tools
Q3UYK1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 4AC98F5C1D0807E7

FASTA40146,502
        10         20         30         40         50         60 
NHTVLHFYRC MISELVHANI TPVVALWQPA APHQGLPHAL AKHGAWENPH TALAFADYAN 

        70         80         90        100        110        120 
LCFKELGHWV NLWITMNEPN TRNMTYRAGH HLLRAHALAW HLYDDKFRAA QKGKISIALQ 

       130        140        150        160        170        180 
ADWIEPACPF SQNDKEVAER VLEFDIGWLA EPIFGSGDYP RVMRDWLNQK NNFLLPYFTE 

       190        200        210        220        230        240 
DEKKLVRGSF DFLAVSHYTT ILVDWEKEDP MKYNDYLEVQ EMTDITWLNS PSQVAVVPWG 

       250        260        270        280        290        300 
LRKVLNWLRF KYGDLPMYVT ANGIDDDPHA EQDSLRIYYI KNYVNEALKA YVLDDINLCG 

       310        320        330        340        350        360 
YFAYSLSDRS APKSGFYRYA ANQFEPKPSM KHYRKIIDSN GFLGSGTLGR FCPEEYTVCT 

       370        380        390        400 
ECGFFQTRKS LLVFISFLVF TFIISLALIF HYSKKGQRSY K

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22211.1.
Tissue: Medulla oblongata EMBL BAE22211.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK134616 mRNA. Translation: BAE22211.1.
IPIIPI00124625.
UniGeneMm.6500.

3D structure databases

ProteinModelPortalQ3UYK1.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3UYK1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1101771. Kl.

Phylogenomic databases

HOVERGENHBG053101.
InParanoidQ3UYK1.

Gene expression databases

ArrayExpressQ3UYK1.
BgeeQ3UYK1.
GenevestigatorQ3UYK1.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ3UYK1_MOUSE
AccessionPrimary (citable) accession number: Q3UYK1
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info