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Q3UY43 (Q3UY43_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAE22370.1
Gene names
Name:Txnrd3 MGI 2386711
OrganismMus musculus (Mouse) EMBL BAE22370.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length581 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAE22370.1

Sequences

Sequence LengthMass (Da)Tools
Q3UY43 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: A84850989DF02205

FASTA58163,422
        10         20         30         40         50         60 
SCPVRPRPVR SVLKFSAALP ASSPRRPPAS RFLSRPGSAR SDNKALEKPP SPPPPPRAQT 

        70         80         90        100        110        120 
SPGLGKVGVL PNRRLGAVRG GLMSSPPGRR ARLASPGTSR PSSEAREELR RRLRDLIEGN 

       130        140        150        160        170        180 
RVMIFSKSYC PHSTRVKELF SSLGVVYNIL ELDQVDDGAS VQEVLTEISN QKTVPNIFVN 

       190        200        210        220        230        240 
KVHVGGCDRT FQAHQNGLLQ KLLQDDSAHD YDLIIIGGGS GGLSCAKEAA NLGKKVMVLD 

       250        260        270        280        290        300 
FVVPSPQGTT WGLGGTCVNV GCIPKKLMHQ AALLGHALQD AKKYGWEYNQ QVKHNWEAMT 

       310        320        330        340        350        360 
EAIQSHIGSL NWGYRVTLRE KGVTYVNSFG EFVDLHKIKV QQLEKGLPGK LKVVAKSTEG 

       370        380        390        400        410        420 
PETVEGIYNT VLLAIGRDSC TRKIGLEKIG VKINEKNGKI PVNDVEQTNV PHVYAIGDIL 

       430        440        450        460        470        480 
DGKPELTPVA IQAGKLLARR LFGVSLEKCD YINIPTTVFT PLEYGCCGLS EEKAIEMYKK 

       490        500        510        520        530        540 
ENLEVYHTLF WPLEWTVAGR DNNTCYAKII CNKFDNERVV GFHLLGPNAG EITQGFAAAM 

       550        560        570        580 
KCGLTKQLLD DTIGIHPTCG EVFTTLEITK SSGLDITQKG C

« Hide

References

[1]"High-efficiency full-length cDNA cloning."
Carninci P., Hayashizaki Y.
Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[2]"Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[3]"RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer."
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A. expand/collapse author list , Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.
Genome Res. 10:1757-1771(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[4]"Functional annotation of a full-length mouse cDNA collection."
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature 409:685-690(2001)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[5]"Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
Nature 420:563-573(2002)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[6]Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H. expand/collapse author list , Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[7]"The Transcriptional Landscape of the Mammalian Genome."
The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science 309:1559-1563(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
[8]"Antisense Transcription in the Mammalian Transcriptome."
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
Science 309:1564-1566(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL BAE22370.1.
Tissue: Olfactory brain EMBL BAE22370.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK134987 mRNA. Translation: BAE22370.1.
IPIIPI00989267.
RefSeqNP_001171530.1. NM_001178059.1.
NP_001171531.1. NM_001178060.1.
UniGeneMm.229332.

3D structure databases

ProteinModelPortalQ3UY43.
ModBaseSearch...

Proteomic databases

PRIDEQ3UY43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID232223.
KEGGmmu:232223.
UCSCuc012eou.1. mouse.

Organism-specific databases

CTD114112.
MGIMGI:2386711. Txnrd3.

Phylogenomic databases

HOGENOMHOG000276712.
HOVERGENHBG004959.
KOK00384.

Gene expression databases

ArrayExpressQ3UY43.
BgeeQ3UY43.
GenevestigatorQ3UY43.

Family and domain databases

Gene3D3.30.390.30. 1 hit.
3.40.30.10. 1 hit.
InterProIPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR002109. Glutaredoxin.
IPR011899. Glutaredoxin_euk/vir.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
IPR012999. Pyr_OxRdtase_I_AS.
IPR012336. Thioredoxin-like_fold.
IPR006338. Thioredoxin/glutathione_Rdtase.
[Graphical view]
PANTHERPTHR22912:SF23. PTHR22912:SF23. 1 hit.
PfamPF00462. Glutaredoxin. 1 hit.
PF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
PRINTSPR00368. FADPNR.
SUPFAMSSF55424. FAD/NAD-linked_reductase_dimer. 1 hit.
SSF52833. Thiordxn-like_fd. 1 hit.
TIGRFAMsTIGR02180. GRX_euk. 1 hit.
PROSITEPS51354. GLUTAREDOXIN_2. 1 hit.
PS00076. PYRIDINE_REDOX_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio380996.
SOURCESearch...

Entry information

Entry nameQ3UY43_MOUSE
AccessionPrimary (citable) accession number: Q3UY43
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: May 29, 2013
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info