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Unreviewed, UniProtKB/TrEMBL Q3UY08 (Q3UY08_MOUSE)

Last modified January 19, 2010. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL BAE22405.1
Gene names
Name: Cacna1c MGI 103013
OrganismMus musculus (Mouse) EMBL BAE22405.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

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Protein attributes

Sequence length149 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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Ontologies

Gene Ontology (GO)
   Biological processadult walking behavior

Inferred from genetic interaction. Source: MGI

calcium ion transport

Inferred from direct assay. Source: MGI

calcium ion-dependent exocytosis

Inferred from mutant phenotype. Source: MGI

cellular calcium ion homeostasis

Inferred from mutant phenotype. Source: MGI

glucose homeostasis

Inferred from mutant phenotype. Source: MGI

growth hormone secretion

Inferred from direct assay. Source: MGI

insulin secretion

Inferred from mutant phenotype. Source: MGI

regulation of blood pressure

Inferred from mutant phenotype. Source: MGI

regulation of organ growth

Inferred from mutant phenotype. Source: MGI

regulation of vasoconstriction

Inferred from mutant phenotype. Source: MGI

smooth muscle contraction involved in micturition

Inferred from mutant phenotype. Source: MGI

synaptic transmission

Inferred from mutant phenotype. Source: MGI

visual learning

Inferred from mutant phenotype. Source: MGI

   Cellular componentT-tubule

Traceable author statement. Source: MGI

caveolar macromolecular signaling complex

Inferred from direct assay. Source: MGI

cell soma

Inferred from direct assay. Source: MGI

dendritic shaft

Inferred from direct assay. Source: MGI

membrane fraction

Inferred from direct assay. Source: MGI

voltage-gated calcium channel complex

Traceable author statement. Source: MGI

   Molecular functiondihydropyridine-sensitive calcium channel activity

Traceable author statement. Source: MGI

protein binding

Inferred from physical interaction. Source: MGI

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q3UY08-1 [UniParc].

Last modified October 11, 2005. Version 1.
Checksum: 516388A8A8EBC2D3

FASTA14915,936
        10         20         30         40         50         60 
MPWGEAGARR RSRTAGPTSA TCSPQGWRDA GGFFIRFNVP NGFVSEVPHC SRDLEVTGTA 

        70         80         90        100        110        120 
SSFTAVGISL RAGRCTESAF QGRRPRPWCG GSSTFRGSTA QRTPPPPLSK RVFSPCLYKQ 

       130        140 
SFAHVLSEPG RLYGAGPQGS MAGMGQRPQ

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References

[1]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL BAE22405.1.
Tissue: Olfactory brain EMBL BAE22405.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK135061 mRNA. Translation: BAE22405.1.
IPIIPI00652543.
RefSeqNP_033911.2.
UniGeneMm.436656

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ3UY08.

Proteomic databases

PRIDEQ3UY08.

Genome annotation databases

EnsemblENSMUST00000112825; ENSMUSP00000108444; ENSMUSG00000051331; Mus musculus. [Genome view]
GeneID12288.

Organism-specific databases

CTD12288.
MGIMGI:103013. Cacna1c.

Phylogenomic databases

HOVERGENQ3UY08.

Gene expression databases

ArrayExpressQ3UY08.
BgeeQ3UY08.
GenevestigatorQ3UY08.

Family and domain databases

ProtoNetSearch...

Other Resources

SOURCESearch...

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Entry information

Entry nameQ3UY08_MOUSE
AccessionPrimary (citable) accession number: Q3UY08
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: January 19, 2010
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information