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Protein
Submitted name:

Transcription factor 12

Gene

Tcf12

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor 12Imported
Gene namesi
Name:Tcf12Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:101877. Tcf12.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000032228.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini407 – 460BHLH (basic helix-loop-helix)InterPro annotationAdd BLAST54

Sequence similaritiesi

Contains 1 basic helix-loop-helix (bHLH) domain.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00510000046438.
HOVERGENiHBG003854.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
[Graphical view]
SMARTiSM00353. HLH. 1 hit.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3UXQ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYCAYPVPGM GNNSLMYYYN GKTVYAPSPN SDDFNRESPS YPSPKPPTSM
60 70 80 90 100
FASTFFMQDG THSSSDLWSS SNGMSQPGFG GILGTSTSHM SQSSSYGSLH
110 120 130 140 150
SHDRLSYPPH SVSPTDINTS LPPMSSFHRG STSSSPYVAA SHTPPINGSD
160 170 180 190 200
SILGTRGNAA GSSQTGDALG KALASIYSPD HTSSSFPSNP STPVGSPSPL
210 220 230 240 250
TGTSQWPRAG GQAPSSPSYE NSLHSLQSRM EDRLDRLDDA IHVLRNHAVG
260 270 280 290 300
PSTSLPTSHS DIHSLLGPSH NASIGNLNSN YGGSSLVTNS RSASMVGTHR
310 320 330 340 350
EDSVSLNGNH SVLSSTVAAS NTELNHKTPE NFRGGVQNQS GSVVPTEIKT
360 370 380 390 400
ENKEKDENLH EPPSSDDMKS DDESSQKDIK VSSRGRTSST NEDEDLNPEQ
410 420 430 440 450
KIEREKERRM ANNARERLRV RDINEAFKEL GRMCQLHLKS EKPQTKLLIL
460 470
HQAVAVILSL EQQVRERNLN PKAACLK
Length:477
Mass (Da):51,425
Last modified:October 11, 2005 - v1
Checksum:i321078AEA65B4F78
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei477Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093483 Genomic DNA. No translation available.
AC157575 Genomic DNA. No translation available.
AC159001 Genomic DNA. No translation available.
AK135376 mRNA. Translation: BAE22510.1.
RefSeqiNP_001240792.1. NM_001253863.1.
NP_001240793.1. NM_001253864.1.
UniGeneiMm.171615.
Mm.480117.

Genome annotation databases

EnsembliENSMUST00000184448; ENSMUSP00000139334; ENSMUSG00000032228.
GeneIDi21406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC093483 Genomic DNA. No translation available.
AC157575 Genomic DNA. No translation available.
AC159001 Genomic DNA. No translation available.
AK135376 mRNA. Translation: BAE22510.1.
RefSeqiNP_001240792.1. NM_001253863.1.
NP_001240793.1. NM_001253864.1.
UniGeneiMm.171615.
Mm.480117.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000184448; ENSMUSP00000139334; ENSMUSG00000032228.
GeneIDi21406.

Organism-specific databases

CTDi6938.
MGIiMGI:101877. Tcf12.

Phylogenomic databases

GeneTreeiENSGT00510000046438.
HOVERGENiHBG003854.

Miscellaneous databases

ChiTaRSiTcf12. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032228.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
[Graphical view]
SMARTiSM00353. HLH. 1 hit.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3UXQ3_MOUSE
AccessioniPrimary (citable) accession number: Q3UXQ3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: November 30, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.