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Protein
Submitted name:

Nuclear respiratory factor 1

Gene

Nrf1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear respiratory factor 1Imported
Gene namesi
Name:Nrf1Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:1332235. Nrf1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiQ3UXF4. baseline and differential.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000065568.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini87 – 295209Nrf1_DNA-bindInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IDYK. Eukaryota.
ENOG410XNU7. LUCA.
GeneTreeiENSGT00390000006835.
HOGENOMiHOG000273898.
HOVERGENiHBG003062.

Family and domain databases

InterProiIPR019525. Nrf1_NLS/DNA-bd_dimer.
[Graphical view]
PfamiPF10491. Nrf1_DNA-bind. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UXF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEHGVTQTE HMATIEAHAV AQQVQQVHVA TYTEHSMLSA DEDSPSSPED
60 70 80 90 100
TSYDDSDILN STAADEVTAH LAAAVLGIKP RASHILGPVG MAAAAAVATG
110 120 130 140 150
KKRKRPHVFE SNPSIRKRQQ TRLLRKLRAT LDEYTTRVGQ QAIVLCISPS
160 170 180 190 200
KPNPVFKVFG AAPLENVVRK YKSMILEDLE SALAEHAPAP QEVNSELPPL
210 220 230 240 250
TIDGIPVSVD KMTQAQLRAF IPEMLKYSTG RGKPGWGKES CKPIWWPEDI
260 270 280 290 300
PWANVRSDVR TEEQKQRVSW TQALRTIVKN CYKQHGREDL LYAFEDQQTQ
310 320 330 340 350
TQATTTHSIA HLVPSQTVVQ TFSNPDGTVS LIQVGTGATV ATLADASELP
360 370 380 390 400
TTVTVAQVNY SAVADGEVEQ NWATLQGGEM TIQTTQASEA TQAVASLAEA
410 420 430 440 450
AVAASQEMQQ GATVTMALNS EAAAHAVATL AEATLQGGGQ IVLSGETAAA
460 470 480 490 500
VGALTGVQDA NGLGSPVLPE IMASKTRGYR HSCGRDLYRL FSFFLLYSKN
510 520 530
NERILLAPAT SGSPCFYVRN IITIRVGILS S
Length:531
Mass (Da):57,093
Last modified:October 11, 2005 - v1
Checksum:i982BC4390F511DCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134897 Genomic DNA. No translation available.
AC153632 Genomic DNA. No translation available.
AK135673 mRNA. Translation: BAE22609.1.
RefSeqiNP_001157701.1. NM_001164229.1.
XP_011239349.1. XM_011241047.1.
UniGeneiMm.259258.

Genome annotation databases

EnsembliENSMUST00000069831; ENSMUSP00000067447; ENSMUSG00000058440.
ENSMUST00000115199; ENSMUSP00000110853; ENSMUSG00000058440.
GeneIDi18181.
UCSCiuc009bex.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134897 Genomic DNA. No translation available.
AC153632 Genomic DNA. No translation available.
AK135673 mRNA. Translation: BAE22609.1.
RefSeqiNP_001157701.1. NM_001164229.1.
XP_011239349.1. XM_011241047.1.
UniGeneiMm.259258.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000065568.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000069831; ENSMUSP00000067447; ENSMUSG00000058440.
ENSMUST00000115199; ENSMUSP00000110853; ENSMUSG00000058440.
GeneIDi18181.
UCSCiuc009bex.1. mouse.

Organism-specific databases

CTDi4899.
MGIiMGI:1332235. Nrf1.

Phylogenomic databases

eggNOGiENOG410IDYK. Eukaryota.
ENOG410XNU7. LUCA.
GeneTreeiENSGT00390000006835.
HOGENOMiHOG000273898.
HOVERGENiHBG003062.

Miscellaneous databases

ChiTaRSiNrf1. mouse.
SOURCEiSearch...

Gene expression databases

ExpressionAtlasiQ3UXF4. baseline and differential.

Family and domain databases

InterProiIPR019525. Nrf1_NLS/DNA-bd_dimer.
[Graphical view]
PfamiPF10491. Nrf1_DNA-bind. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: In vitro fertilized eggsImported.
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  10. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ3UXF4_MOUSE
AccessioniPrimary (citable) accession number: Q3UXF4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: June 8, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.