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Q3UWM1

- Q3UWM1_MOUSE

UniProt

Q3UWM1 - Q3UWM1_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Selp

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium-dependent protein binding Source: MGI
    2. glycoprotein binding Source: MGI
    3. protein binding Source: MGI
    4. sialic acid binding Source: MGI

    GO - Biological processi

    1. cellular response to interleukin-6 Source: MGI
    2. heterophilic cell-cell adhesion Source: MGI
    3. inflammatory response Source: MGI
    4. leukocyte cell-cell adhesion Source: MGI
    5. leukocyte migration Source: MGI
    6. leukocyte tethering or rolling Source: MGI
    7. positive regulation of leukocyte migration Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:SelpImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:98280. Selp.

    Subcellular locationi

    GO - Cellular componenti

    1. external side of plasma membrane Source: MGI
    2. membrane Source: MGI

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ3UWM1.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000236254.
    InParanoidiQ3UWM1.

    Family and domain databases

    InterProiIPR002396. Selectin_superfamily.
    IPR000436. Sushi_SCR_CCP.
    [Graphical view]
    PfamiPF00084. Sushi. 2 hits.
    [Graphical view]
    PRINTSiPR00343. SELECTIN.
    SMARTiSM00032. CCP. 2 hits.
    [Graphical view]
    SUPFAMiSSF57535. SSF57535. 2 hits.
    PROSITEiPS50923. SUSHI. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q3UWM1-1 [UniParc]FASTAAdd to Basket

    « Hide

    ITSLPAPAVR CPALTTPGQG TMSCQHHLGS FGPNTTCYFG CKTGFTLRGA    50
    NSLRCRASGQ WTAVTPMCRA VKCSELHMDT AVAMNCSNPW GNFSYGSTCT 100
    FQCPEGQSLN GSVRATCRED GHWSDAMPTC QAGTLTIQEA LTYLGGAVAS 150
    TTGLAVGGTL LALLRKRLRK KDDGKCPLNP HSHLGTYGVY TNAAYDPTP 199
    Length:199
    Mass (Da):21,029
    Last modified:October 11, 2005 - v1
    Checksum:i49B56C2A7C716D5F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK136243 mRNA. Translation: BAE22893.1.
    UniGeneiMm.3337.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK136243 mRNA. Translation: BAE22893.1 .
    UniGenei Mm.3337.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:98280. Selp.

    Phylogenomic databases

    HOGENOMi HOG000236254.
    InParanoidi Q3UWM1.

    Miscellaneous databases

    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q3UWM1.

    Family and domain databases

    InterProi IPR002396. Selectin_superfamily.
    IPR000436. Sushi_SCR_CCP.
    [Graphical view ]
    Pfami PF00084. Sushi. 2 hits.
    [Graphical view ]
    PRINTSi PR00343. SELECTIN.
    SMARTi SM00032. CCP. 2 hits.
    [Graphical view ]
    SUPFAMi SSF57535. SSF57535. 2 hits.
    PROSITEi PS50923. SUSHI. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: In vitro fertilized eggsImported.

    Entry informationi

    Entry nameiQ3UWM1_MOUSE
    AccessioniPrimary (citable) accession number: Q3UWM1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)