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Q3UVG4

- Q3UVG4_MOUSE

UniProt

Q3UVG4 - Q3UVG4_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Htr5a
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. serotonin receptor activity Source: MGI

GO - Biological processi

  1. G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger Source: Ensembl
  2. cAMP-mediated signaling Source: MGI
  3. hippocampus development Source: Ensembl
  4. response to estradiol Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Htr5aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:96283. Htr5a.

Subcellular locationi

GO - Cellular componenti

  1. Golgi apparatus Source: Ensembl
  2. dendrite Source: Ensembl
  3. integral component of membrane Source: InterPro
  4. perikaryon Source: Ensembl
  5. rough endoplasmic reticulum Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiQ3UVG4.
BgeeiQ3UVG4.
GenevestigatoriQ3UVG4.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000038884.

Structurei

3D structure databases

ProteinModelPortaliQ3UVG4.

Family & Domainsi

Phylogenomic databases

InParanoidiQ3UVG4.
KOiK04161.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR001397. 5HT5A_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERiPTHR24247:SF14. PTHR24247:SF14. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00518. 5HT5ARECEPTR.
PR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q3UVG4-1 [UniParc]FASTAAdd to Basket

« Hide

FYLPLCVVLF VYWKIYRAAK FRMGSRKTNS VSPVPEAVEV KNATQHPQMV    50
FTVRHATVTF QTEGDTWREQ KEQRAALMVG ILIGVFVLCW FPFFVTELIS 100
PLCSWDVPAI WKSIFLWLGY SNSFFNPLIY TAFNRSYSSA FKVFFSKQQ 149
Length:149
Mass (Da):17,388
Last modified:October 11, 2005 - v1
Checksum:i4CCED102ABFB1606
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK137323 mRNA. Translation: BAE23305.1.
RefSeqiNP_032340.2. NM_008314.2.
UniGeneiMm.4835.

Genome annotation databases

GeneIDi15563.
KEGGimmu:15563.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK137323 mRNA. Translation: BAE23305.1 .
RefSeqi NP_032340.2. NM_008314.2.
UniGenei Mm.4835.

3D structure databases

ProteinModelPortali Q3UVG4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000038884.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 15563.
KEGGi mmu:15563.

Organism-specific databases

CTDi 3361.
MGIi MGI:96283. Htr5a.

Phylogenomic databases

InParanoidi Q3UVG4.
KOi K04161.

Miscellaneous databases

NextBioi 288522.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q3UVG4.
Bgeei Q3UVG4.
Genevestigatori Q3UVG4.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR001397. 5HT5A_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
PANTHERi PTHR24247:SF14. PTHR24247:SF14. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00518. 5HT5ARECEPTR.
PR00237. GPCRRHODOPSN.
PROSITEi PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiQ3UVG4_MOUSE
AccessioniPrimary (citable) accession number: Q3UVG4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: April 16, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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