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Q3UT27

- Q3UT27_MOUSE

UniProt

Q3UT27 - Q3UT27_MOUSE

Protein
Submitted name:

Putative uncharacterized protein

Gene

Abcb5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (11 Oct 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATPase activity, coupled to transmembrane movement of substances Source: RefGenome
    2. ATP binding Source: InterPro

    GO - Biological processi

    1. antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent Source: RefGenome
    2. antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent Source: RefGenome
    3. antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent Source: RefGenome
    4. positive regulation of antigen processing and presentation of peptide antigen via MHC class I Source: RefGenome
    5. transmembrane transport Source: RefGenome

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Name:Abcb5Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:1924956. Abcb5.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: RefGenome

    PTM / Processingi

    Proteomic databases

    PRIDEiQ3UT27.

    PTM databases

    PhosphoSiteiQ3UT27.

    Expressioni

    Gene expression databases

    BgeeiQ3UT27.
    GenevestigatoriQ3UT27.

    Interactioni

    Protein-protein interaction databases

    STRINGi10090.ENSMUSP00000098544.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3UT27.
    SMRiQ3UT27. Positions 5-118.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    InParanoidiQ3UT27.
    KOiK05660.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR011527. ABC1_TM_dom.
    IPR003439. ABC_transporter-like.
    IPR001140. ABC_transptr_TM_dom.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00664. ABC_membrane. 2 hits.
    PF00005. ABC_tran. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    SSF90123. SSF90123. 1 hit.
    PROSITEiPS50929. ABC_TM1F. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3UT27-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGIGLQTKFN TLVGEKGAQM SGGQKQRIAI ARALVRNPKI LILDEATSAL    50
    DTESESLVQT ALEKASKGRT TIVVAHRLST IRGADLIVTM KDGMVVEKGT 100
    HAELMAKQGL YYSLAMAQDI KKVDEQMESR TCSTAGNASY GSLCDVNSAK 150
    APCTDQLEEA VHHQKTSLPE VSLLKIFKLS KSEWPFVVLG TLASALNGSV 200
    HPVFSIIFGK LVTMFEDKNK ATLKQDAELY SMMLVVLGIV ALVTYLMQGL 250
    FYGRAEENLA MRLRHSAFKA MLYQAATSRL GIVTQDVSNM SLSILISFIY 300
    GWEMTLLILS FAPVLAVTGM IQTAAMAGFA NRDKQALKRA GKIATEAVEN 350
    IRTVVSLTRE RAFEQMYEET LQTQHRPAHP NFSCDFTKRK SSANTTKKYR 400
    FPRNHLILSE GTESTYF 417
    Length:417
    Mass (Da):45,956
    Last modified:October 11, 2005 - v1
    Checksum:i96D99A88FC0FE958
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK139832 mRNA. Translation: BAE24153.1.
    RefSeqiNP_084237.1. NM_029961.2.
    UniGeneiMm.261496.

    Genome annotation databases

    GeneIDi77706.
    KEGGimmu:77706.
    UCSCiuc007pii.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK139832 mRNA. Translation: BAE24153.1 .
    RefSeqi NP_084237.1. NM_029961.2.
    UniGenei Mm.261496.

    3D structure databases

    ProteinModelPortali Q3UT27.
    SMRi Q3UT27. Positions 5-118.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10090.ENSMUSP00000098544.

    PTM databases

    PhosphoSitei Q3UT27.

    Proteomic databases

    PRIDEi Q3UT27.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 77706.
    KEGGi mmu:77706.
    UCSCi uc007pii.1. mouse.

    Organism-specific databases

    CTDi 340273.
    MGIi MGI:1924956. Abcb5.

    Phylogenomic databases

    InParanoidi Q3UT27.
    KOi K05660.

    Miscellaneous databases

    NextBioi 347405.
    SOURCEi Search...

    Gene expression databases

    Bgeei Q3UT27.
    Genevestigatori Q3UT27.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR011527. ABC1_TM_dom.
    IPR003439. ABC_transporter-like.
    IPR001140. ABC_transptr_TM_dom.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00664. ABC_membrane. 2 hits.
    PF00005. ABC_tran. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    SSF90123. SSF90123. 1 hit.
    PROSITEi PS50929. ABC_TM1F. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "High-efficiency full-length cDNA cloning."
      Carninci P., Hayashizaki Y.
      Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
      Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
      Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    4. "Functional annotation of a full-length mouse cDNA collection."
      The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
      Nature 409:685-690(2001)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
      The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
      Nature 420:563-573(2002)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    6. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    7. "The Transcriptional Landscape of the Mammalian Genome."
      The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
      Science 309:1559-1563(2005)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: C57BL/6JImported.
      Tissue: EggImported.

    Entry informationi

    Entry nameiQ3UT27_MOUSE
    AccessioniPrimary (citable) accession number: Q3UT27
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2005
    Last sequence update: October 11, 2005
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)