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Q3UT27

- Q3UT27_MOUSE

UniProt

Q3UT27 - Q3UT27_MOUSE

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Protein
Submitted name: Putative uncharacterized protein
Gene
Abcb5
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. ATPase activity, coupled to transmembrane movement of substances Source: RefGenome

GO - Biological processi

  1. antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent Source: RefGenome
  2. antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent Source: RefGenome
  3. antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent Source: RefGenome
  4. positive regulation of antigen processing and presentation of peptide antigen via MHC class I Source: RefGenome
  5. transmembrane transport Source: RefGenome
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Abcb5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1924956. Abcb5.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: RefGenome
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ3UT27.

PTM databases

PhosphoSiteiQ3UT27.

Expressioni

Gene expression databases

BgeeiQ3UT27.
GenevestigatoriQ3UT27.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000098544.

Structurei

3D structure databases

ProteinModelPortaliQ3UT27.
SMRiQ3UT27. Positions 5-118.

Family & Domainsi

Phylogenomic databases

InParanoidiQ3UT27.
KOiK05660.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR001140. ABC_transptr_TM_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UT27-1 [UniParc]FASTAAdd to Basket

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MGIGLQTKFN TLVGEKGAQM SGGQKQRIAI ARALVRNPKI LILDEATSAL    50
DTESESLVQT ALEKASKGRT TIVVAHRLST IRGADLIVTM KDGMVVEKGT 100
HAELMAKQGL YYSLAMAQDI KKVDEQMESR TCSTAGNASY GSLCDVNSAK 150
APCTDQLEEA VHHQKTSLPE VSLLKIFKLS KSEWPFVVLG TLASALNGSV 200
HPVFSIIFGK LVTMFEDKNK ATLKQDAELY SMMLVVLGIV ALVTYLMQGL 250
FYGRAEENLA MRLRHSAFKA MLYQAATSRL GIVTQDVSNM SLSILISFIY 300
GWEMTLLILS FAPVLAVTGM IQTAAMAGFA NRDKQALKRA GKIATEAVEN 350
IRTVVSLTRE RAFEQMYEET LQTQHRPAHP NFSCDFTKRK SSANTTKKYR 400
FPRNHLILSE GTESTYF 417
Length:417
Mass (Da):45,956
Last modified:October 11, 2005 - v1
Checksum:i96D99A88FC0FE958
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK139832 mRNA. Translation: BAE24153.1.
RefSeqiNP_084237.1. NM_029961.2.
UniGeneiMm.261496.

Genome annotation databases

GeneIDi77706.
KEGGimmu:77706.
UCSCiuc007pii.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK139832 mRNA. Translation: BAE24153.1 .
RefSeqi NP_084237.1. NM_029961.2.
UniGenei Mm.261496.

3D structure databases

ProteinModelPortali Q3UT27.
SMRi Q3UT27. Positions 5-118.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10090.ENSMUSP00000098544.

PTM databases

PhosphoSitei Q3UT27.

Proteomic databases

PRIDEi Q3UT27.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 77706.
KEGGi mmu:77706.
UCSCi uc007pii.1. mouse.

Organism-specific databases

CTDi 340273.
MGIi MGI:1924956. Abcb5.

Phylogenomic databases

InParanoidi Q3UT27.
KOi K05660.

Miscellaneous databases

NextBioi 347405.
SOURCEi Search...

Gene expression databases

Bgeei Q3UT27.
Genevestigatori Q3UT27.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR001140. ABC_transptr_TM_dom.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEi PS50929. ABC_TM1F. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.

Entry informationi

Entry nameiQ3UT27_MOUSE
AccessioniPrimary (citable) accession number: Q3UT27
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 3, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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