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Protein
Submitted name:

Putative uncharacterized protein

Gene

Abcb5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Name:Abcb5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1924956. Abcb5.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ3UT27.

PTM databases

PhosphoSiteiQ3UT27.

Structurei

3D structure databases

ProteinModelPortaliQ3UT27.
SMRiQ3UT27. Positions 5-118.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK05660.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3UT27-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIGLQTKFN TLVGEKGAQM SGGQKQRIAI ARALVRNPKI LILDEATSAL
60 70 80 90 100
DTESESLVQT ALEKASKGRT TIVVAHRLST IRGADLIVTM KDGMVVEKGT
110 120 130 140 150
HAELMAKQGL YYSLAMAQDI KKVDEQMESR TCSTAGNASY GSLCDVNSAK
160 170 180 190 200
APCTDQLEEA VHHQKTSLPE VSLLKIFKLS KSEWPFVVLG TLASALNGSV
210 220 230 240 250
HPVFSIIFGK LVTMFEDKNK ATLKQDAELY SMMLVVLGIV ALVTYLMQGL
260 270 280 290 300
FYGRAEENLA MRLRHSAFKA MLYQAATSRL GIVTQDVSNM SLSILISFIY
310 320 330 340 350
GWEMTLLILS FAPVLAVTGM IQTAAMAGFA NRDKQALKRA GKIATEAVEN
360 370 380 390 400
IRTVVSLTRE RAFEQMYEET LQTQHRPAHP NFSCDFTKRK SSANTTKKYR
410
FPRNHLILSE GTESTYF
Length:417
Mass (Da):45,956
Last modified:October 11, 2005 - v1
Checksum:i96D99A88FC0FE958
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK139832 mRNA. Translation: BAE24153.1.
RefSeqiNP_084237.1. NM_029961.2.
UniGeneiMm.261496.

Genome annotation databases

GeneIDi77706.
KEGGimmu:77706.
UCSCiuc007pii.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK139832 mRNA. Translation: BAE24153.1.
RefSeqiNP_084237.1. NM_029961.2.
UniGeneiMm.261496.

3D structure databases

ProteinModelPortaliQ3UT27.
SMRiQ3UT27. Positions 5-118.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiQ3UT27.

Proteomic databases

PRIDEiQ3UT27.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi77706.
KEGGimmu:77706.
UCSCiuc007pii.1. mouse.

Organism-specific databases

CTDi340273.
MGIiMGI:1924956. Abcb5.

Phylogenomic databases

KOiK05660.

Miscellaneous databases

NextBioi347405.
SOURCEiSearch...

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "High-efficiency full-length cDNA cloning."
    Carninci P., Hayashizaki Y.
    Methods Enzymol. 303:19-44(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  2. "Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes."
    Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.
    Genome Res. 10:1617-1630(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  4. "Functional annotation of a full-length mouse cDNA collection."
    The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
    Nature 409:685-690(2001)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  5. "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs."
    The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
    Nature 420:563-573(2002)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  7. "The Transcriptional Landscape of the Mammalian Genome."
    The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
    Science 309:1559-1563(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.
  8. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: C57BL/6JImported.
    Tissue: EggImported.

Entry informationi

Entry nameiQ3UT27_MOUSE
AccessioniPrimary (citable) accession number: Q3UT27
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2005
Last sequence update: October 11, 2005
Last modified: July 22, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.